Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis JJ

 Score =  686 bits (1771), Expect = 0.0
 Identities = 358/729 (49%), Positives = 518/729 (71%), Gaps = 1/729 (0%)

Query: 1   MKLGTKKIGTKLLIFSIITVIIPIAILGIVSNNTITQDMKEQSADKLESSNEMANTIMDS 60
           MK+  KKIGTK+L+F I+  +IP+ I+G VS + I+ +M+ Q  + ++ + ++    +++
Sbjct: 1   MKISFKKIGTKILVFMILCAVIPLMIVGGVSTDKISNEMEIQGENSVDFNLKILEETINN 60

Query: 61  RFTELCTLAEYASYTQGVKTSIKTGNVDDLELRAETLKSASNADLVIFTGNGGSTIASSS 120
             +E  T  +Y +    V  +I   +   L   AE +K +S  DL+ FT   G+ I+SS 
Sbjct: 61  IQSEFETTTDYTANLDVVSDAISNNDNGILLNFAENMKESSEVDLIAFTDKDGNIISSSD 120

Query: 121 GEGITLDSTILKVSKSSEKSGFEKIPEQTALKFSDADVTGTDSALSIVVAYPIYDDAGTL 180
                L   + K+  +  +S F  I    A K+SD  V  T+ AL++    P+Y+    +
Sbjct: 121 NTQTNLKPIVSKLLGNEVQSSFLIISGAEASKYSDYKVDKTNDALALCAVAPVYNSGKLV 180

Query: 181 GYVAFIDVLNNDHTLVDSIKASTGDESTLFLENYRISTSVVSGNSRAVGTTASDVVYNTV 240
           G V  +D++N D   VD +K  TG+E+T+FL+N RIST+V +    A GTTAS+ VY T 
Sbjct: 181 GSVTLVDIVNKDDQWVDRVKQVTGNEATIFLKNVRISTTVQTNGRDATGTTASEEVY-TK 239

Query: 241 VKENTEFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQFTQLVNNARNNTIIIA 300
              + E +G+A V+GQS++TKY P++D  G  +GM+FVGTPE  F  ++N  RN  II+A
Sbjct: 240 SLNHQEHVGTATVLGQSYITKYSPIEDIEGNVVGMIFVGTPEGPFLAVINGIRNQIIIVA 299

Query: 301 LFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTGDELEELANSFNKMA 360
           + GLL++++I+L + R ITKPI +L+ G  +FG+G+YD+  NVKTGDEL+EL++SFN MA
Sbjct: 300 IAGLLLSILIALYTGRKITKPIEELKKGTSEFGNGNYDYKTNVKTGDELQELSDSFNGMA 359

Query: 361 KDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIENV 420
            +IK L   +D DK+ LA  L  + ++M+++A+GDF+ RADEN   N LQK IN A+ NV
Sbjct: 360 GNIKNLMKTMDMDKVELANLLNNVTNVMNNVAKGDFTARADENTENNTLQKAINTAVANV 419

Query: 421 SKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDEL 480
           ++++++L+ E+ +L+ +++ V + LK A+ET+ QVT+AA QVA A++DQS+KLQ+ SD+L
Sbjct: 420 AQLIKDLREEVDLLNIQVQKVEDELKSAEETATQVTEAATQVAEASSDQSSKLQEASDQL 479

Query: 481 EKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELG 540
           E T   A  VY+ AE++V SA E+ +NSE GV+KVENAI  MQ ITNVIDELGK+IQ LG
Sbjct: 480 ENTYGVAKEVYSAAEETVKSAEEISENSENGVEKVENAISRMQSITNVIDELGKAIQMLG 539

Query: 541 EESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVE 600
           ++ KKIN+VT LIKD+AEQTGLLALNASIEAARAGDAGKGFAVVASEIK+LAEEIKKSVE
Sbjct: 540 DDGKKINDVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVE 599

Query: 601 DINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKD 660
           DINRTI+G+N+++E T+DLGL G+DEVD+GV+AIDEVN A ++IK SV  +A  I  IK 
Sbjct: 600 DINRTIDGVNRRIEDTMDLGLKGKDEVDKGVIAIDEVNDALLRIKGSVNDAAIKINDIKK 659

Query: 661 NAKNASNNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISRK 720
            A++A++NT+ AL+N QDIA++SEEF ATAEE+TAS+EE N  +EEI   AE++ +++ +
Sbjct: 660 GAQSATDNTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAER 719

Query: 721 LAEDADEFK 729
           + + + +FK
Sbjct: 720 VTKKSGQFK 728