Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 771 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  132 bits (331), Expect = 9e-35
 Identities = 82/301 (27%), Positives = 158/301 (52%), Gaps = 28/301 (9%)

Query: 434 LSDELEDVGEGLKRAKETSEQVTDAA-------NQVATAAADQSAKLQDTSDELEKTAKA 486
           ++++ + +GE   +A+  S+ +++AA       +Q A  +  Q  +  + +  +E+   +
Sbjct: 481 IAEQNKRIGEAATQAETVSQNLSEAAATLEGQIDQAARGSDIQRQRTAEAATAMEQMNAS 540

Query: 487 ADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKI 546
              V  +A  + + A   +  ++ G   +++++ T+++   + D L + + ELG++++ I
Sbjct: 541 VMEVARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTLREHMGELGKQAEDI 600

Query: 547 NEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTI 606
             V  +I D+A+QT LLALNA+IEAARAG+AG+GFAVVA E++ LAE+   +  +++  I
Sbjct: 601 GRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATREVDTAI 660

Query: 607 NGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNAS 666
            GI     + ID      D ++ G   + +      +I   VET+A              
Sbjct: 661 KGIQTSARSNIDNTRKATDAIEVGTGMVGKSGEILREIVRLVETTAD------------- 707

Query: 667 NNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISRKLAEDAD 726
                   +V++IA+ SEE +A +E++T S++E NR   E   + ++     + +A  AD
Sbjct: 708 --------SVRNIATASEEQSAASEQITRSTDEINRIASETADAMQQSARAVQDVASLAD 759

Query: 727 E 727
           E
Sbjct: 760 E 760



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 47/248 (18%)

Query: 315 SRSITKPINQLEDGVHKFGSGDYDHTINVKTGDELEELANSFNK----MAKDIKELHSML 370
           +R+      Q E   HK   G      +V+T  E ++LA++  +    + K  +++  +L
Sbjct: 545 ARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTLREHMGELGKQAEDIGRVL 604

Query: 371 D-----ADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMME 425
           D     AD+ +L      I       A   F+V ADE R   KL +   +A   V   ++
Sbjct: 605 DVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVR---KLAEKTMNATREVDTAIK 661

Query: 426 NLKSE--------------ITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSA 471
            +++               I V +  +   GE L+      E   D+   +ATA+ +QSA
Sbjct: 662 GIQTSARSNIDNTRKATDAIEVGTGMVGKSGEILREIVRLVETTADSVRNIATASEEQSA 721

Query: 472 KLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDE 531
                    E+  ++ D +   A ++ D+              ++ +   +Q + ++ DE
Sbjct: 722 AS-------EQITRSTDEINRIASETADA--------------MQQSARAVQDVASLADE 760

Query: 532 LGKSIQEL 539
           L   I+E+
Sbjct: 761 LHGVIEEM 768