Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 818 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  146 bits (368), Expect = 5e-39
 Identities = 142/626 (22%), Positives = 272/626 (43%), Gaps = 96/626 (15%)

Query: 178 GTLGYVAFIDVLNNDHTLVDSIKASTGDESTLFL---ENYRISTSVVSGNSRAV-----G 229
           GT+  V  + + N     +   ++  G     +L   +    S S +    R V     G
Sbjct: 205 GTVAGVVVLQISNEQINAIMQERSGMGTSGETYLVGPDKRMRSDSFLDSKGRTVNASFAG 264

Query: 230 TTASDVVYNTVVKENTEFMGSANVV----GQSFLTKYVPLKDSNGATIGMVFVGTPEAQF 285
           T   + V     ++       A ++    G   L+ Y PLK   G T   +     EA+ 
Sbjct: 265 TVERNGVDTEASRDALTGTSGARIINDYNGNPVLSVYAPLKV--GDTTWALIAEIDEAEV 322

Query: 286 TQLVNNARNNTIIIALFG--LLIAVV---ISLVSSRSITKPINQLEDGVHKFGSGDYDHT 340
            Q V      T+ +AL G  LL+A+V   ++ + +RS+T+P+  + D      SGD D  
Sbjct: 323 HQPVR-----TLNLALSGGALLVALVMLGVAWLVARSVTRPVASIRDFAANIASGDLDAQ 377

Query: 341 INVKTGDELEELANSFNKMAKDIKE----LHSMLDADKLSLAKTLKE--IFDIMDHLAEG 394
           +      EL ELA +  +M  ++KE       +L A  + +  T ++  I  + DHL   
Sbjct: 378 LAGDFRGELLELAEAIRRMVTELKERLGFATGVLRAIPIPVVTTDRQGDITFVNDHLITY 437

Query: 395 DFSVRADENRHKNKLQK-------------TINHAIENVSKMMENLKSE----------- 430
               R  E   K +  +              I+H  E  ++  ENL+++           
Sbjct: 438 MAEPRPVEYWSKGRKAEELFGDECPTCSALAISHGKETQTE--ENLRTKKGDLRTARLTA 495

Query: 431 ------------ITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSD 478
                         VL  +L D+    +  + T+E ++ AA+   + +   S+   + + 
Sbjct: 496 APLHDRDGNAIGAIVLFLDLTDLKRQEEAIRRTNEAISKAADHADSISQQVSSAATEIAS 555

Query: 479 ELEKTAKAADMVYNDAEQSVDSAIEVK--------------DNSETGVKKVENAIDTMQK 524
           ++E++A+ +D+      +S  +  E+               + ++T +++  +  + +Q+
Sbjct: 556 QVEESARGSDIQRERTTESATAIEEMNATTMEVARNASLAAEQADTAIRQARSGEEVVQR 615

Query: 525 ITNVI-------DELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDA 577
           + + I       + L  S++ LG ++  I +V V+I D+A+QT LLALNA+IEAARAG+A
Sbjct: 616 VVDAIGTVRERSETLKHSLETLGVQADAIGQVMVVINDIADQTNLLALNAAIEAARAGEA 675

Query: 578 GKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEV 637
           G+GFAVVA E++ LAE+   +  ++   ++ I       I        E+D+   A+ E 
Sbjct: 676 GRGFAVVADEVRKLAEKTMNATREVGEAVHAIQSGARGNI-------QEMDKAAEAVGES 728

Query: 638 NSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISEEFAATAEELTASS 697
                +  +++ T   ++    D  +N +   ++     ++I   S+E +A A E   + 
Sbjct: 729 TRLAGEAGKALGTIVSIVETTADQVRNIATAAEQQSAASEEINRASDEISAIASETAQAM 788

Query: 698 EEQNRAVEEIDASAEKMMEISRKLAE 723
            +   AV E+   A+++ E+ R++ +
Sbjct: 789 AQSAEAVTELSRLAQELREVIREMVQ 814