Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  129 bits (324), Expect = 5e-34
 Identities = 86/326 (26%), Positives = 163/326 (50%), Gaps = 19/326 (5%)

Query: 379 KTLKEIFDIMDHLAEGD--FSVR---ADENRHKNKLQKTINHAIENVSKMMENLKSEITV 433
           K L+ +   ++ +AEGD   +VR   A+ +     L    N  +E +  M+  +      
Sbjct: 302 KDLERVALALNDIAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHK---- 357

Query: 434 LSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYND 493
           ++ +LE   +G      +S   TD + ++A     Q  ++   +  + + A A + + ++
Sbjct: 358 IAGQLEYQAQG------SSASATDNSQRIAV----QQDEVTMVATAVTEMASATEEIASN 407

Query: 494 AEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLI 553
           AE +  +A +    S  G K+V  +  +++ + N ++  G+ I EL E S+KIN + + I
Sbjct: 408 AEHTAQTAQDAVGLSNHGQKQVMQSQQSIRNLANEVETAGRIISELNEHSQKINSILLTI 467

Query: 554 KDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKV 613
             +AEQT LLALNA+IEAARAG+ G+GFAVVA E++ L++    S ++I   I  + +  
Sbjct: 468 SGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTA 527

Query: 614 ETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEAL 673
              +       D  +  V   +  + + ++I +++   + M +QI   A+  ++ T E  
Sbjct: 528 GKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDMASQIATAAEEQTSVTSEIN 587

Query: 674 RNVQDIASISEEFAATAEELTASSEE 699
           RN + I  +SE  +  A+     ++E
Sbjct: 588 RNTESIREVSENLSIEAQSSMVQAQE 613



 Score = 37.0 bits (84), Expect = 3e-06
 Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 33/213 (15%)

Query: 512 VKKVENAIDTMQKITNVIDELGK--------SIQELGEESKKINEVTVLIKDVAEQTGLL 563
           V+++   I  M KI   ++   +        + Q +  +  ++  V   + ++A  T  +
Sbjct: 345 VERLHGMISRMHKIAGQLEYQAQGSSASATDNSQRIAVQQDEVTMVATAVTEMASATEEI 404

Query: 564 ALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAG 623
           A NA   A  A DA             L+   +K V    ++I  +  +VET      AG
Sbjct: 405 ASNAEHTAQTAQDA-----------VGLSNHGQKQVMQSQQSIRNLANEVET------AG 447

Query: 624 RDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASIS 683
           R         I E+N    KI   + T + +  Q    A NA+     A    +  A ++
Sbjct: 448 R--------IISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 499

Query: 684 EEFAATAEELTASSEEQNRAVEEIDASAEKMME 716
           +E    ++   +S++E    +E +  +A K ++
Sbjct: 500 DEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVK 532