Pairwise Alignments

Query, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase from Methanococcus maripaludis S2

Subject, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (334), Expect = 1e-35
 Identities = 118/444 (26%), Positives = 199/444 (44%), Gaps = 30/444 (6%)

Query: 2   KIYIEGYGCTLNTADTQIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMISRI 61
           KI     GC  N  D++ I   +   E +E+ ++  DSD++++NTC          +  I
Sbjct: 34  KIGFVSLGCPKNLVDSERILTQLRT-EGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92

Query: 62  EYFKSLDKKVVVAGCMAKALSKKIENLADVLIMPREAQHSGNILKDKLLKDFSEKNNEST 121
                 + KV+V GC+  A   +I       + P     +G      +L+   +   +  
Sbjct: 93  GEALKENGKVIVTGCLG-AREDEIRQ-----VHPNVLGITGPHAYQNVLEHVHQYAPKPA 146

Query: 122 QNLNFEDKLNEKIKKVSSQGLITALPICEGCLGSCTYCIVKRARGNLASYDRDLIVKKAE 181
            N  F   + +   K++ +     L I EGC   CT+CI+   RG+L S     I+ +AE
Sbjct: 147 HN-PFTSLVPDHGVKLTPKHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAE 204

Query: 182 ELVKSGTKCLLVTAQDTACYGLDNNDSL--------PNLINDISEIPEKFAMRIGMMHAK 233
            L  +G K LLV +QDT+ YG+D   SL         + I  +SE   K  + +  +H  
Sbjct: 205 RLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWV-RLHYV 263

Query: 234 FAEPILDELIESFKSEKVVKFLHLPIQSGDDQVLKDMNRNYTVDEYISVLNEFKSKIKNL 293
           +  P +DE+I      KV+ +L +P Q    +VLK M R    +  +  + +++     L
Sbjct: 264 YPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPEL 323

Query: 294 NFTTDVIVGFPTETEEAFENTLEIVKKIKPDFTHAAKYSQRKYTKA-AILKQVDTKIRKE 352
              +  IVGFP ETEE F+  L+ +K+ + D     KYS  +   A  I  Q+   ++++
Sbjct: 324 VIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQD 383

Query: 353 RSEILNELRRELSYENNKRHIGETFEILVTK-DNMGV----------TDNCKNVIFEEPA 401
           R E    +++E+S    ++ IG T ++L+ + D  G            D    +  E   
Sbjct: 384 RFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGLVYLNGETNL 443

Query: 402 KIGEFKRVKITGAKTFGLSGKLIN 425
           K GE   V I  A  + L G +++
Sbjct: 444 KPGELVNVVIEHADEYDLWGSILH 467