Pairwise Alignments

Query, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase from Methanococcus maripaludis S2

Subject, 474 a.a., tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  165 bits (417), Expect = 3e-45
 Identities = 115/446 (25%), Positives = 228/446 (51%), Gaps = 32/446 (7%)

Query: 2   KIYIEGYGCTLNTADTQIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMISRI 61
           K++I+ +GC +N  D+  + + + E++ + LT+  +++DI+++NTC +R++ + ++  ++
Sbjct: 4   KLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVFHQL 63

Query: 62  EYFKSLDKK-----VVVAGCMAKALSKKIENLA---DVLIMPREAQHSGNILKDKLLKDF 113
             +K+L  K     + V GC+A    K I++ A   D++  P+       +++       
Sbjct: 64  GRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIEQV----- 118

Query: 114 SEKNNESTQNLNF-EDKLNEKIKKVSSQGLITALPICEGCLGSCTYCIVKRARGNLASYD 172
             +  ++  +++F E +  +++ +  ++G    + I EGC   C++C+V   RG   S  
Sbjct: 119 -RRGEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRP 177

Query: 173 RDLIVKKAEELVKSGTKCLLVTAQDTACYGLDNND----SLPNLINDISEIPEKFAMRIG 228
            D I+ +  +L + G + + +  Q+   Y    +D    +   L+  ++ I     +R  
Sbjct: 178 SDDIILEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGIDRIRFT 237

Query: 229 MMHA-KFAEPILDELIESFKSEKVVKFLHLPIQSGDDQVLKDMNRNYTVDEYISVLNEFK 287
             H  +F + I+D   ++    ++V FLHLP+QSG D++L  M R +   EY S++   +
Sbjct: 238 TSHPIEFTQDIIDVYEDT---PELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLR 294

Query: 288 SKIKNLNFTTDVIVGFPTETEEAFENTLEIVKKIKPDFTHAAKYSQRKYTKAAIL-KQVD 346
               ++  ++D I+GFP ET+E F +T+++++ +  D + +  YS R  T AA L   VD
Sbjct: 295 KARPDIQISSDFIIGFPGETQEDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVD 354

Query: 347 TKIRKERSEILNELRRELSYENNKRHIGETFEILVTKDNM-------GVTDNCKNVIFEE 399
            + +K+R  IL +   + +   ++  +G    ILV   ++       G T+N + V FE 
Sbjct: 355 MEEKKQRLAILQDRITQQAMRYSRHMMGTVQRILVEGPSVKNPMELRGRTENNRVVNFEG 414

Query: 400 -PAKIGEFKRVKITGAKTFGLSGKLI 424
            P  IG F  V+I    T  L GK I
Sbjct: 415 LPKHIGTFVDVEIVDVYTNSLRGKFI 440