Pairwise Alignments

Query, 137 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 325 a.a., carbohydrate isomerase, KpsF/GutQ family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 9   VKNIM--SSDVVSVSPESGVVEAFEALLKNKISCLPVVNQNNETIGIVTTTDIGYNLIID 66
           V N+M    D+  V  +  + +A   + K  +    ++++ N+ +GI T  D+   +I  
Sbjct: 202 VSNVMHCGDDLPLVKHDICITDALYEISKKGLGMTAIIDEQNKLVGIFTDGDLR-RVIDA 260

Query: 67  EYTLETT-IADVMTKKVVTIKQDESAVDALKKMDLYGDGREIINQLPVINSENKLVGILS 125
           +  L TT IADVMT+  VTI ++  A  AL+ MD        IN L VI+ EN  VG L+
Sbjct: 261 QVNLRTTPIADVMTRNCVTITENVLAAQALQVMD-----SRNINGLIVIDKENHPVGALN 315

Query: 126 DGDILRA 132
             D+++A
Sbjct: 316 MLDMVKA 322



 Score = 33.9 bits (76), Expect = 2e-06
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 85  IKQDESAVDALKKMDLYGDGREIINQLPVINSENKLVGILSDGDILRAI 133
           +K D    DAL ++   G G   I     I+ +NKLVGI +DGD+ R I
Sbjct: 215 VKHDICITDALYEISKKGLGMTAI-----IDEQNKLVGIFTDGDLRRVI 258



 Score = 22.3 bits (46), Expect = 0.007
 Identities = 9/14 (64%), Positives = 12/14 (85%)

Query: 121 VGILSDGDILRAIS 134
           +G+LSD DI+ AIS
Sbjct: 87  LGVLSDNDIILAIS 100