Pairwise Alignments

Query, 137 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 172 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 44.3 bits (103), Expect = 9e-10
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 9   VKNIMSSDVVSVSPESGVVEAFEALLKNKISCLPVVNQNNETIGIVTTTD 58
           +  +M  D  S++P   +    E  + NK+ CLPVV+ N + +GIVT++D
Sbjct: 110 IATVMDKDCQSLTPNEPLSTVVEYFIDNKLGCLPVVDNNKKVLGIVTSSD 159



 Score = 37.4 bits (85), Expect = 1e-07
 Identities = 31/140 (22%), Positives = 69/140 (49%), Gaps = 20/140 (14%)

Query: 9   VKNIMSSDVVSVSPESGVVEAFEALLKNKISCLPVVNQNNET-IGIVTTTDIGYNLI--- 64
           V +IMS++V+ +S  + + +A   +    +  LPV+++ +   +G++T   +  +++   
Sbjct: 34  VSDIMSTEVICISDGASLKDAHHLMQTRGVRHLPVISETDGALVGVLTHKKMIASVLSML 93

Query: 65  -------IDEYTLETTIADVMTKKVVTIKQDESAVDALKKMDLYGDGREIINQLPVINSE 117
                  +D     T IA VM K   ++  +E     +   + + D +  +  LPV+++ 
Sbjct: 94  NKYGQGALDRKERYTPIATVMDKDCQSLTPNEPLSTVV---EYFIDNK--LGCLPVVDNN 148

Query: 118 NKLVGILSDGDILRAISKLC 137
            K++GI++  D +    KLC
Sbjct: 149 KKVLGIVTSSDFI----KLC 164