Pairwise Alignments

Query, 256 a.a., tRNA-dihydrouridine synthase from Methanococcus maripaludis S2

Subject, 256 a.a., tRNA-dihydrouridine synthase from Methanococcus maripaludis JJ

 Score =  477 bits (1227), Expect = e-139
 Identities = 239/256 (93%), Positives = 247/256 (96%)

Query: 1   MKKLDKIYTIPKKIVLAPMAGITDGDFCLKYTDTFGIVCLGAFNLDFDTDLASKKICNRG 60
           MKKLDKIY IPKKIVLAPMAGITDGDFCLKY DTFGIVCLGAFNLDFDTDLASKKI NRG
Sbjct: 1   MKKLDKIYKIPKKIVLAPMAGITDGDFCLKYNDTFGIVCLGAFNLDFDTDLASKKIQNRG 60

Query: 61  RKEFIYDLIEIDQKISSEIEKAKKSNSLVSVNIRFNDFSKAKSHIVEISKNADILELNCH 120
           RKEFIY+L EID+KIS EIEKAKKSNSLVSVNIRFNDFSKA+SHI+EISKNADILELNCH
Sbjct: 61  RKEFIYELSEIDEKISFEIEKAKKSNSLVSVNIRFNDFSKAESHIIEISKNADILELNCH 120

Query: 121 CRQPEITYLNLGQNLLKFENESKLINFLENIQKLNLEIPIFLKLRANFLKAEELIKSLDK 180
           CRQPEIT L LGQNLLKFENESKLI+FL+NI KLNLEIPIFLKLRANFLKAEELIKSLDK
Sbjct: 121 CRQPEITDLKLGQNLLKFENESKLIDFLKNIHKLNLEIPIFLKLRANFLKAEELIKSLDK 180

Query: 181 VRGYFDGIHIDCFNPGKNHADLEYLKKIRENFPEKIIIGNNSVNSVESAKEMLEYADFVS 240
           VR YFDGIHIDCFNPGKNHADLEYLKKIRENFPEKIIIGNNSVNSVESAKE+LEYADFVS
Sbjct: 181 VRVYFDGIHIDCFNPGKNHADLEYLKKIRENFPEKIIIGNNSVNSVESAKEILEYADFVS 240

Query: 241 VARCVLSNNIEWINKM 256
           VARCVLSNNI+WINKM
Sbjct: 241 VARCVLSNNIDWINKM 256