Pairwise Alignments

Query, 312 a.a., methionine synthase from Methanococcus maripaludis S2

Subject, 759 a.a., 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 51/301 (16%)

Query: 44  QLNVGIDILSDGQV-RGDMVEIFVSNMYGFEGRRVVNRVEFVKPITLNDIKYSLKY--IS 100
           QL +GID+L  G+  R DMVE F   + G        +  +V+      +K  L Y  +S
Sbjct: 476 QLKLGIDVLVHGEAERNDMVEYFGEQLDGVG----FTQFAWVQSYGSRCVKPPLIYGDVS 531

Query: 101 KKDP-------------EKGVKGIITGACTLASSIRVENYYSDNKDENLIYDLAGALNKE 147
           ++ P             ++ VKG++TG  T+   +       D   E +   LA A+  E
Sbjct: 532 RRQPMTLAWASFAQGLTDRPVKGMLTGPVTI---LHWSFAREDIGREQIANQLALAIRDE 588

Query: 148 ALSIQNH-VKMIQFDEPILSTGL--------YDLEVAKKAMDIITSGIN--VPVAMHVC- 195
              +Q   + +IQ DEP    GL        + L+ A  A  +  +G      +  H+C 
Sbjct: 589 VADLQAAGIGIIQIDEPAFREGLPLKASDWKHYLDWAVAAFKLSAAGAEDETQIHTHMCY 648

Query: 196 GDVSKIFYKLNEFNVDILDHEFASCRKNLEILN-----EITKKVGFGCINTKLKSVDSVD 250
            + +     +   + D++  E  + R ++E+LN     E   ++G G  +    ++ +V+
Sbjct: 649 SEFNATIDAIAAMDADVITIE--TSRSHMELLNAFEDFEYPNEIGPGVYDIHSPNIPTVE 706

Query: 251 EVKALISEGIEILKNNSKFEGSINDSVIIDPDCGMRLLPVDVAYSKLNNMVTAANEIEKD 310
           ++ ALI +    +     +         ++PDCG++    D     L NMV A  E+ + 
Sbjct: 707 QMVALIEKAATKIPVGQLW---------VNPDCGLKTRTWDEVEPALQNMVKATKELRRR 757

Query: 311 L 311
           L
Sbjct: 758 L 758



 Score = 24.6 bits (52), Expect = 0.008
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 21/146 (14%)

Query: 155 VKMIQFDEPILSTGLYD-----LEVAKKAMDIITSGINVPVAMHVCGDVSKIFYKLNEFN 209
           V  +Q DEPIL+  L D      E A K  ++   G+ + +A +  G V+     + +  
Sbjct: 203 VTWVQLDEPILALELDDDWLAAFEPAYK--ELSGQGVKLLLASYY-GSVAHHHELIKDLV 259

Query: 210 VDILDHEFASCRKNLEILN---EITKKVGFGCINTKLKSVDSVDEVKALISEGIEILKNN 266
           VD L  +  S  + L +     + T+ +  G IN +      +D    +++E +  L   
Sbjct: 260 VDGLHLDLVSDAEQLTLFGASLKPTQVLSLGVINGRNVWAADLD----ILAERLRGL--- 312

Query: 267 SKFEGSINDSVIIDPDCGMRLLPVDV 292
                 + + V + P C +  +PVD+
Sbjct: 313 ---VADLGERVWLAPSCSLLHVPVDL 335