Pairwise Alignments

Query, 312 a.a., methionine synthase from Methanococcus maripaludis S2

Subject, 760 a.a., 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 53/308 (17%)

Query: 38  KKALDDQLNVGIDILSDGQV-RGDMVEIFVSNMYGFE----------GRRVVNRVEFVKP 86
           +  +D QL +GID+L  G+  R DMVE F   + G            G R V       P
Sbjct: 471 RDTIDRQLKLGIDVLVHGEAERNDMVEYFGEQLEGVGFTKNGWVQSYGSRCVK-----PP 525

Query: 87  ITLNDIK------YSLKYISKKDPEKGVKGIITGACTLASSIRVENYYSDNKDENLIYDL 140
           +   D+             ++   +K VKG++TG  T+   +       D   + +   L
Sbjct: 526 LIYGDVSRPKAMTVDWAVFAQSLTDKPVKGMLTGPVTI---LHWSFAREDISRDTIATQL 582

Query: 141 AGALNKEALSIQNH-VKMIQFDEPILSTGL--------YDLEVAKKAMDIITSGI--NVP 189
           A A+  E + +Q+  + +IQ DEP    GL          L+ A  A  +  +G+     
Sbjct: 583 ALAIRDEVVDLQHAGIGIIQIDEPAFREGLPLKQSEWQAYLDWAVNAFKLSAAGVVDETQ 642

Query: 190 VAMHVC-GDVSKIFYKLNEFNVDILDHEFASCRKNLEILN-----EITKKVGFGCINTKL 243
           +  H+C  + +     +   + D++  E  + R  +E+LN     E   ++G G  +   
Sbjct: 643 IHTHMCYSEFNDTIAAIAAMDADVITIE--TSRSRMELLNAFEDFEYPNEIGPGVYDIHS 700

Query: 244 KSVDSVDEVKALISEGIEILKNNSKFEGSINDSVIIDPDCGMRLLPVDVAYSKLNNMVTA 303
            +  SV+ +  LI +  + +     +         ++PDCG++    D     L NMV A
Sbjct: 701 PNTPSVEAMVHLIEKAAQKVPVRQLW---------VNPDCGLKTRTWDEVEPALKNMVDA 751

Query: 304 ANEIEKDL 311
             E+ + L
Sbjct: 752 TRELRRRL 759