Pairwise Alignments

Query, 285 a.a., zinc metalloprotease HtpX from Methanococcus maripaludis S2

Subject, 615 a.a., Zn-dependent protease with chaperone function (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 53/308 (17%)

Query: 7   VLLLMALLTGMIYGICYMLGFPPIFAILLA----LIPNLISYFYSDKIVLTSYGAKI--- 59
           +LLL+ L  G++ G   +     +F +LL     +IP LI  +   + +    G      
Sbjct: 41  ILLLLLLFVGLVAGTVGLAFTSSVFLVLLLKKKLIIPLLIIGWMLGRALFLGAGKPEGYR 100

Query: 60  VDENEAPNLHRIVESIANRAN-------IQKPKVAIINTDTPNAFATGRSPKNGVVAVTT 112
           +   EAP L  +V  +            I  P+       TP  F  G  P    + +  
Sbjct: 101 LRRAEAPLLFGLVNELTKSLKTPRVHNIIVTPEFNAAMAQTPRWFVGG--PTENTLIIGL 158

Query: 113 GILQLLNEQELEGVLAHEIGHIKHRDILIGTIVATMAGAIMYIANFLQWGMLFGYGRDDD 172
            +L  L+++EL+ VLAHE+GH+           A   G I Y A  +   M+  +  +  
Sbjct: 159 ELLMSLSKEELKAVLAHELGHLSGDH-------AKFNGKI-YRARAMWEQMMHSF--ESS 208

Query: 173 GNPLQIVASLLFIILAPIAAMVVQFAISRQNEYNADENGAKYSNPIYLANALTKLE---- 228
           G+ +       F   AP       FA++R NEY AD + AK ++     +AL K      
Sbjct: 209 GSLVTYPMRKFFSWYAP-RFSAYSFALARLNEYEADLSAAKQTSAATFQSALVKTSLLAE 267

Query: 229 -----------KGVKYHPLRNGSPATAHMFIVNPFKAGNV-ARL----------FSTHPS 266
                      +     P  +  P TA    ++  + G++  RL           +THP 
Sbjct: 268 ITDEDFWPQYYRRAYEQPAPDTLPYTAFKQFIDAGEFGDLPLRLAKVMAERTSPHNTHPC 327

Query: 267 TEERVKRL 274
           T++RV+ L
Sbjct: 328 TKDRVEAL 335