Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (597), Expect = 2e-65
 Identities = 235/919 (25%), Positives = 375/919 (40%), Gaps = 196/919 (21%)

Query: 62  NEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLV 121
           +E+ + F +FF+ KGH  V+ S +V       +L T A +  F+     GL K       
Sbjct: 6   DEVRRAFLSFFESKGHQIVESSSLVPAN-DPTLLFTNAGMNQFKDCFL-GLEKRAYTRAT 63

Query: 122 IAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKYWTDKTVEYCFELM--- 174
            AQ C+R     ND++NVG T RH T F M  + +F       Y+ +  ++Y +E +   
Sbjct: 64  TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGD-----YFKEDAIQYAWEFLTDV 118

Query: 175 ------------------------QRLGIDGKTITFI-----------ESWWEGG--GNA 197
                                   +++GI    I  I           +++W+ G  G  
Sbjct: 119 LQLPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPC 178

Query: 198 GPCYEVI-THG------------------VELATLVFMQYKKIGND-YEEIPLKIVDTGY 237
           GPC E+   HG                  +E+   VFMQ+ +  +   E +P   VDTG 
Sbjct: 179 GPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGM 238

Query: 238 GIERFAWASQGTPTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLR 297
           GIER +   QG  + YE                 +V + ++  +A   G  D+ N   LR
Sbjct: 239 GIERISAIMQGVHSNYEI----------------DVFQTLIKAAADAIGYQDLTNQS-LR 281

Query: 298 VLRQKVAEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVL 357
           V                            +ADH R  +F+  DG++PSN   GY+ R ++
Sbjct: 282 V----------------------------VADHIRSCAFLIVDGVMPSNEGRGYVLRRII 313

Query: 358 RKTLRYMEKIGISMSI-KDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRG 416
           R+ +R+  K+G   +    ++    E M     EL   +  +  VL  EE+ + +T++RG
Sbjct: 314 RRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIEEENFGRTLDRG 373

Query: 417 RGIVERMAASKSEITLDD--LIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYT 474
             I+       S   LD   + +LYD+ G P ++  DV  +                   
Sbjct: 374 MSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFS--------------- 418

Query: 475 IVAERHEEEKPEEVVSTKKELPELEVSKTELLFFKHPTQVEF------------------ 516
            + E   E+  EE     +E  +       L+  K  T  EF                  
Sbjct: 419 -IDEAGFEQAMEEQRQRAREAGQFGTDYNSLI--KSATNTEFCGYTASRGQSVVREMFVE 475

Query: 517 --EAKVLKIVEK-YVVLDKTLFYAEGGGQKYDIGQLND----IEVMDVQKK-NGIVFHKV 568
             E   L   +K  +VLD T FYAE GGQ  D G L        V D QK  N I  H V
Sbjct: 476 GAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGV 535

Query: 569 SDISKFKEGDTVKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRL 628
                   GD V   V+   R  +  NH+ATH+++AA  +VLG+HV Q GS V  E  R 
Sbjct: 536 IAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRF 595

Query: 629 DITHYERISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLR 688
           D +H E ++  ++KE+ER+ N+ V     + +  M+ ++A+ K    ++  G    D +R
Sbjct: 596 DFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALF--GEKYDDQVR 653

Query: 689 IIEIEGTDVEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTL 748
           ++ +     E CGG H SNT + G  K++    I  G+ R+E  TG G++          
Sbjct: 654 VLSMGDFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGAL---------- 703

Query: 749 IDSAEILGIPNDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVL 808
               + L     Q    V     + K  +K I++L+ K+       L ++ + +    VL
Sbjct: 704 ----DYLDAQQAQHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVL 759

Query: 809 VEQVSGTPNELMS---------------IADNLAVGNKLIVLMNENDYLLCKRGENVELS 853
           V Q++G  N+ +                +  N+A G   ++    ND  L  + +  EL 
Sbjct: 760 VAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTND--LTNKVKAGELV 817

Query: 854 MKDLIRNIGKGGGKDNLAQ 872
               ++  GKGGG+ ++AQ
Sbjct: 818 NMVALQVGGKGGGRPDMAQ 836