Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 899 a.a., alanyl-tRNA synthetase from Pseudomonas syringae pv. syringae B728a

 Score =  238 bits (608), Expect = 9e-67
 Identities = 236/908 (25%), Positives = 399/908 (43%), Gaps = 158/908 (17%)

Query: 63  EMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLVI 122
           E+ + F  FF+E+GHT V  S ++       +L T A +  F+     G  K      V 
Sbjct: 30  EIREAFLGFFEEQGHTRVASSSLIPGN-DPTLLFTNAGMNQFKDCFL-GQEKRAYTRAVT 87

Query: 123 AQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFN------------------------ 154
           +Q C+R     ND++NVG T RH T F M  + +F                         
Sbjct: 88  SQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEKWLNLP 147

Query: 155 ---------SKDD--YKYWTDKTVEYCFELMQRLGIDGKTITFIESWWEGG--GNAGPCY 201
                    + DD  Y  WT K +    E M R+G +       +++W  G  G  GPC 
Sbjct: 148 KEKLWVTVYATDDEAYDIWT-KEIGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCS 206

Query: 202 EVI-THG------------------VELATLVFMQYKKIGNDY-EEIPLKIVDTGYGIER 241
           E+   HG                  +E+   VFMQ+ +  +     +P   VDTG G+ER
Sbjct: 207 EIFFDHGPEIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLER 266

Query: 242 FAWASQGTPTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQ 301
            +   Q   + YE                 ++ + ++A SA   G  + +N   L+V   
Sbjct: 267 VSAVLQHVHSNYEI----------------DLFQSLLAASAKAIGCSN-DNQASLKV--- 306

Query: 302 KVAEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTL 361
                                    +ADH R   F+  DG++PSN   GY+ R ++R+  
Sbjct: 307 -------------------------VADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRAC 341

Query: 362 RYMEKIGISMSI-KDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIV 420
           R+  K+G   S    I++  +  M   +PEL   + +I  VL  EE+++ +T+ +G  I+
Sbjct: 342 RHGNKLGAKGSFFYQIVAALVAEMGSAFPELVQQQSHIERVLKGEEEQFAKTLEQGLKIL 401

Query: 421 ER-MAASKSEITLDDLI-ELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYT--IV 476
           E+ +A  K  +   +++ +LYD+ G P ++  D+  + N        +T+ +  +   + 
Sbjct: 402 EQDLADLKGTVVPGEVVFKLYDTYGFPMDLTGDIARERN--------LTLDEAGFEREMD 453

Query: 477 AERHEEEKPEEVVSTKKELPELEV------------SKTELLFFKHPTQVEFEAKVLKIV 524
           A+R               L +++V            S + +  +K    V   + + +  
Sbjct: 454 AQRVRARSASSFGMDYNSLVKVDVATQFTGYSATTGSASVVALYKEGQSV---SHLNEGE 510

Query: 525 EKYVVLDKTLFYAEGGGQKYDIGQLND----IEVMDVQKKNG-IVFHKVSDISKFKEGDT 579
           E  V+LD T FYAE GGQ  D G L       +V D  K  G  + H V        G  
Sbjct: 511 EGVVILDITPFYAESGGQIGDSGFLQAGDARFDVSDTTKTGGAFLHHGVVASGSLSVGAQ 570

Query: 580 VKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERISRE 639
           V+  V  + R     NH+ATH+++AA  +VLG+HV Q GS VD+++ R D +H+E I  E
Sbjct: 571 VETQVADEVRDATKLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKAE 630

Query: 640 QVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEGT-DVE 698
           Q++ +E I N  +     V +   D + A++K    ++  G   GD++R++ + G   VE
Sbjct: 631 QLRALEDIVNAEIRKNTEVMTEETDIDTAKKKGAMALF--GEKYGDSVRVLSMGGEFSVE 688

Query: 699 ACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDSAEILGIP 758
            CGG H S T +    K++    +  GV R+E  TG  +++ + S ED L ++A ++   
Sbjct: 689 LCGGIHASRTGDIALFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEAATLVKGN 748

Query: 759 NDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSGTPNE 818
            D L   +    E  +  +K +E+LQ K       +L+    +V   +VL  ++ G   +
Sbjct: 749 RDNLLDKLTAVIERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLDGQDGK 808

Query: 819 -LMSIADNL--AVGNKLIVL--MNENDYLL---CKRGENVELSMKDLIRNI-----GKGG 865
            L+++ D L   +G  +I+L  ++E+  +L     +    +L   DL++       GKGG
Sbjct: 809 ALLALVDQLKNKLGRAVILLGSVHEDKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGGKGG 868

Query: 866 GKDNLAQG 873
           G+ ++AQG
Sbjct: 869 GRPDMAQG 876