Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 899 a.a., alanyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  233 bits (593), Expect = 5e-65
 Identities = 211/831 (25%), Positives = 364/831 (43%), Gaps = 141/831 (16%)

Query: 62  NEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLV 121
           +++ + F  FF+ KGH  +  + ++ +     +LLTIA +  F+P      V  V     
Sbjct: 32  DQIRETFLKFFEGKGHRRLPSASLIPED--PTVLLTIAGMLPFKPIFLGQQVAEVPRATT 89

Query: 122 IAQPCIRLNDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKYWTDKTVEYCFELM------- 174
            +Q CIR NDI+NVGRT RH T F M  + +F       Y+  + + + +EL+       
Sbjct: 90  -SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGD-----YFKKEAIAFAWELVTEVFQVP 143

Query: 175 --------------------QRLGIDGKTITFI---ESWWEGG--GNAGPCYEVI----- 204
                                ++G+    I  +   +++W  G  G  GPC E+      
Sbjct: 144 AERLAVSVFEEDDEAFAIWRDQIGVPEARIQRLGAKDNFWASGPTGPCGPCSEIYYDFHP 203

Query: 205 ------------THGVELATLVFMQYKK-IGNDYEEIPLKIVDTGYGIERFAWASQGTPT 251
                       +  +E+  LVFMQY +    +   +  + +DTG G+ER A   QG P 
Sbjct: 204 ELGNDGLDLEDDSRFIEVYNLVFMQYNRDAAGNLTALEKQNIDTGMGLERMAQVLQGVPN 263

Query: 252 VYES-LFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKVAEKIGMD 310
            YE+ L   II+ +   A I + D    +ES                    KV+ K+   
Sbjct: 264 NYETDLIFPIIQAV---AAIAQRDYASESESV-------------------KVSLKV--- 298

Query: 311 VDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRYMEKIGIS 370
                           I DH R ++ +  DG+  SN+  GY+ R ++R+ +R+   IGI 
Sbjct: 299 ----------------IGDHLRAVTHLIADGVTASNLGRGYVLRRLIRRVVRHGRLIGID 342

Query: 371 MSIK-DIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIV-ERMAASKS 428
                +I    +  M   YP L   +  I   L  EE+++++T+ RG  ++ E +AA+  
Sbjct: 343 RPFTAEIAETAIALMAAQYPNLREREAAIKAELTREEQRFLETLERGEKLLAELLAAATD 402

Query: 429 EITLDDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAERHEEEKPEEV 488
           +I  +D   LYD+ G P E+ +++ ++      K + + +      + A+R   +   E 
Sbjct: 403 QIRGEDAFVLYDTYGFPLELTQEIAEE------KGLTVDLAGFEAAMAAQRQRSQAAHET 456

Query: 489 VSTKKELPELEVSKTELLFFKHPTQ------VEFEAKVLKIVEK-------------YVV 529
           +        ++ S   L    HPT+          AKV  ++ +              +V
Sbjct: 457 IDLT-----VQGSLDRLAEQIHPTEFVGYGDAVATAKVTALLREGQSVEAAEAGDRVQIV 511

Query: 530 LDKTLFYAEGGGQKYDIGQLND----IEVMDVQKKNGIVFHKVS-DISKFKEGDTVKGAV 584
           LD T FYAE GGQ  D G L      + + DVQK++G   H    +    + GD+V   +
Sbjct: 512 LDHTPFYAESGGQVGDRGVLTGESLIVRIEDVQKESGFFVHYGQIERGLLQVGDSVTAQI 571

Query: 585 NWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERISREQVKEI 644
           +   R +   NHTATH++ AA   ++ + + Q GS V  ++ R D      ++ E++++I
Sbjct: 572 DRACRRRAQANHTATHLLQAALKLIVDEGISQAGSLVAFDRLRFDFNCPRAVTPEELRQI 631

Query: 645 ERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEGTDVEACGGTH 704
           E   N+ +          M    A+ K    ++  G   G  +R+I++ G  +E CGGTH
Sbjct: 632 EDQINQWIAEAHGTVVEVMPIATAKAKGAVAMF--GEKYGAEVRVIDVPGVSMELCGGTH 689

Query: 705 CSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLI-DSAEILGIPNDQLP 763
            +NT+E G  K++    +  GV R+E   G  +V E  ++ D ++ D ++      ++L 
Sbjct: 690 VANTAEIGLFKIISEAGVASGVRRIEAVAG-PAVLEYLNVRDAVVRDLSDRFKAKPEELS 748

Query: 764 KTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSG 814
             V    EE K  +K +  L+ ++       L  +   VG+ +VLVE ++G
Sbjct: 749 DRVTALQEELKANQKQLTALKAELAIAKSDALVSQAIPVGDAQVLVETLTG 799