Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 883 a.a., alanyl-tRNA synthetase AlaS from Phaeobacter inhibens DSM 17395

 Score =  207 bits (528), Expect = 2e-57
 Identities = 228/924 (24%), Positives = 399/924 (43%), Gaps = 174/924 (18%)

Query: 60  TYNEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAV--FQPWVTSGLVKPVK 117
           T N++   F N+F ++GH  V  SP+V    R+D  L  A+  +  F+   T    +  K
Sbjct: 3   TLNDIRSTFLNYFAKQGHEIVSSSPLVP---RNDPTLMFANSGMVQFKNCFTGVETRDYK 59

Query: 118 NPLVIAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNS--KDDY----------KY 161
                +Q C+R     ND+DNVG T RH T F M  + +F    K++           ++
Sbjct: 60  RATT-SQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIPFAWDLITKEF 118

Query: 162 WTDK---------TVEYCFELMQRLGIDGKTITFIES---WWEGG--GNAGPCYEVI-TH 206
             DK         T +  FE+ +++G+    I  I++   +W+ G  G  GPC E+   H
Sbjct: 119 GIDKSRLLTTVYHTDDEAFEIWKKVGVPEDRIIRIDTSDNFWQMGPTGPCGPCTEIFYDH 178

Query: 207 G------------------VELATLVFMQYKKIGND-YEEIPLKIVDTGYGIERFAWASQ 247
           G                  +E+  +VFMQ ++  +   + + ++ +DTG G+ER     Q
Sbjct: 179 GDHIWGGPPGSADEDGDRFIEIWNVVFMQNEQFEDGTMKALDMQSIDTGMGLERIGALLQ 238

Query: 248 GTPTVYES-LFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKVAEK 306
           G+   Y++ LF  +IE                      A + +++  GD     Q V  +
Sbjct: 239 GSHDNYDTDLFKALIE--------------------ASADVTNVDPYGD-----QNVHHR 273

Query: 307 IGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRYMEK 366
           +                   IADH R  SF+  DG++PSN   GY+ R ++R+ +R+   
Sbjct: 274 V-------------------IADHLRSTSFLMADGVMPSNDGRGYVLRRIMRRAMRHAHL 314

Query: 367 IGISMSIKD-IISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVERMAA 425
           +G    +   ++   ++ M   YPEL   +  I + L  EE ++ QT++RG  +++   +
Sbjct: 315 LGAKDPVMHRLVPALVQQMGAAYPELGRAQPMIEETLHQEETRFKQTLDRGLKLLDDELS 374

Query: 426 SKSE---ITLDDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAERHEE 482
              E   +      +LYD+ G P ++ +D    L +KG+        D F + +AE+  +
Sbjct: 375 GLDEGAPLPGAAAFKLYDTFGFPLDLTQDA---LREKGRTVDT----DGFDSAMAEQKAK 427

Query: 483 EKP------EEVVSTKKELPELEVSKTELLFFKHPTQVEFEAKVLKIV------------ 524
            +       E   ST       +   T+ L ++       E +++ +V            
Sbjct: 428 ARAAWSGSGESADSTIWFDVADQAGTTDFLGYETEAA---EGQIMALVVDGAQVAEAGVG 484

Query: 525 -EKYVVLDKTLFYAEGGGQKYDIGQLND----IEVMDVQKKNGIVFHKVSDISKFKEGDT 579
            +  VVL++T FYAE GGQ  D G++      + V D +K  G+  H      K + G  
Sbjct: 485 TDVQVVLNQTPFYAESGGQVGDSGEIRVDGGVVRVTDTKKAAGVFIH----FGKVESGMI 540

Query: 580 VKGA-----VNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYE 634
            KGA     V+   R  +  NH+ATH+++ A    LG HV Q GS    ++ R D +H +
Sbjct: 541 TKGAAAQLEVDHLRRSAIRANHSATHLLHEALREALGDHVAQRGSLNADDRLRFDFSHNK 600

Query: 635 RISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEI-- 692
            +S E+++ +    N  +     V +  M  +DA       ++  G   GD +R++ +  
Sbjct: 601 ALSGEELRRVAVDVNRFIRQNTVVETRIMTPDDARALGAQALF--GEKYGDEVRVVSMGE 658

Query: 693 ----EGTD-----VEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIAS 743
               +G D     +E CGGTH   T + G   +L       GV R+E  TG  + + +  
Sbjct: 659 AATGKGQDGNTYSIELCGGTHVRQTGDIGTFVILSDSASSAGVRRIEALTGAEAFAHLDR 718

Query: 744 LEDTLIDSAEILGIPNDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVG 803
               + + A  L    +++   +K   +E K  +  + +L+++V        A + + VG
Sbjct: 719 EALRMAEVANSLKAQPEEVMDRLKALMDERKALQNEVSQLKQQVAMGGGAGGASETKEVG 778

Query: 804 NYEVL---VEQVSGTPNELMSIADNLAVGNKLIVLM-NENDYLLCKRGE----NVELSMK 855
               L   +E VSG     +  A    +G+ +I+L+ N+   +    G       E+S  
Sbjct: 779 GKTFLGQALEGVSGKDLRGLIDAHKQKIGSGVILLIANDGGKVAVAAGVTDDLTAEVSAV 838

Query: 856 DLIRNI-----GK-GGGKDNLAQG 873
           D+++       GK GGG+ ++AQG
Sbjct: 839 DVLKAAVPAVGGKGGGGRPDMAQG 862