Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 879 a.a., alanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  232 bits (591), Expect = 9e-65
 Identities = 231/918 (25%), Positives = 407/918 (44%), Gaps = 168/918 (18%)

Query: 60  TYNEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDD--ILLTIASIAVFQPWVTSGLVKPVK 117
           T NE+ + F  F+   GH  V+ S +V K   DD  +L T A +  F+  +  G  K   
Sbjct: 3   TANEIRRRFLEFYKAHGHEAVRSSSLVPK---DDPSLLFTNAGMVQFKK-IFLGQEKRAY 58

Query: 118 NPLVIAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNS--KDD-----YKYWTDK- 165
           +    +Q C+R+    ND++NVGRT RH T F M  + +F    K+D     +K+ T++ 
Sbjct: 59  SRATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEEL 118

Query: 166 ---------TVEYCFELMQRLGIDGKTITFI--------ESWWEGG--GNAGPCYEVI-- 204
                    TV    +  ++L +    I           +++W  G  G  GPC E++  
Sbjct: 119 KLPKERLYATVFRDDDEAEQLWLKHSDIPAERIYRMGEKDNFWSMGDTGPCGPCSEILID 178

Query: 205 -----THG-------------VELATLVFMQYKKIGNDYEE-IPLKIVDTGYGIERFAWA 245
                T G             +E+  LVFMQY +      E +P   +DTG G+ER    
Sbjct: 179 QGEHMTCGPDCGIGKCDCDRFLEIWNLVFMQYDQDATGKREPLPKPSIDTGMGLERITAV 238

Query: 246 SQGTPTVYES-LFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKVA 304
            QG  + +++ +F  II+                       GL ++    D         
Sbjct: 239 CQGVFSNFDTDIFQAIIQYT--------------------CGLANVSYRSD--------- 269

Query: 305 EKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRYM 364
                  DE D  +        IADH+R ++FM  DGI+PSN   GY+ R ++R+  R+ 
Sbjct: 270 -------DETDTALR------VIADHSRAIAFMITDGILPSNEGRGYVLRRLIRRAYRFG 316

Query: 365 EKIGISMSIKDIISMQLEN-MKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVERM 423
             IG++ +     ++++ + M + YPEL    +++  V+  EE ++ +T+++G  ++E  
Sbjct: 317 RLIGLTDTFLHKTALKVVDIMGDDYPELRENSDFMARVVREEEDRFNRTLDKGLSMLEDE 376

Query: 424 AASKS-----EITLDDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAE 478
            A+ S      +  D    LYD+ G P +IV D+ +      K+  ++   D F  ++ E
Sbjct: 377 LATLSASGAAHVPGDIAFRLYDTFGFPLDIVNDIAE------KRGFSVD-EDGFKALMKE 429

Query: 479 RHEEEKPEEVVSTKKEL-----PELEVS-KTELLFFKHPTQVEFEAKVLKIVEK------ 526
           + E  K     S +K++     P LE   ++E + + H      E +++ ++++      
Sbjct: 430 QKERAKAAWKGSGEKDIASRFQPLLEEGMRSEFIGYDHLCG---EGRIVALMDEHALAVE 486

Query: 527 --------YVVLDKTLFYAEGGGQKYDIGQL----NDIEVMDVQKKNG-IVFHKVSDISK 573
                   Y+V ++T FY   GGQ  DIG +      + V+D  K +  +V H V  +  
Sbjct: 487 RLAAGQKGYLVTNRTPFYGASGGQSGDIGTIASPSGKVRVVDTIKPSPELVVHHVEAV-- 544

Query: 574 FKEGDT-----VKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRL 628
             EGD      V   V  D+R+   RNHT TH+++AA  RVLG HV Q GS V  ++ R 
Sbjct: 545 --EGDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRF 602

Query: 629 DITHYERISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLR 688
           D TH   ++ E++  +ER  N ++++ +P+ +  M  +DA ++    ++  G   GD +R
Sbjct: 603 DFTHIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALF--GEKYGDEVR 660

Query: 689 IIEIEGTDVEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTL 748
           ++ I    VE CGGTH   T + G   ++    +  GV R+E  TG  ++  + +     
Sbjct: 661 VVAIADESVELCGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAVLAQRSEQ 720

Query: 749 IDSAEILGIPNDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVL 808
              + +L     ++   V+   +E +  +K +E    +        + D+  +V   ++L
Sbjct: 721 AQLSAMLKARPGEIVSRVESLQKENRTLRKDMERAAAQATSGQGRNIMDEATDVAGVKLL 780

Query: 809 VEQVSGTPN-----ELMSIADNLAVGNKLIVLMNEND----YLLCKRGENVELSMKDLIR 859
             +V   PN     +LM    +  V     +   + D     +   +      +   LI+
Sbjct: 781 AAKVE-VPNVKALRDLMDDVRSKLVSGIACLAAVDGDKVQLIIAVSKDLQTRFTAPQLIK 839

Query: 860 NI-----GKGGGKDNLAQ 872
           ++     G GGG+ ++AQ
Sbjct: 840 DVAAEVGGSGGGRPDMAQ 857