Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 874 a.a., alanyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  234 bits (596), Expect = 2e-65
 Identities = 232/914 (25%), Positives = 392/914 (42%), Gaps = 153/914 (16%)

Query: 68  FTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLVIAQPCI 127
           F  FF   GH  V  S +V       +L T A +  F+  V  G+ K        AQ C+
Sbjct: 12  FLEFFRSNGHQVVDSSSLVPGN-DPTLLFTNAGMNQFKD-VFLGMDKRSYTRATTAQRCV 69

Query: 128 RL----NDIDNVGRTGRHLTCFTMGAHHAFNS---KDDYKY-WTD--------------- 164
           R     ND+DNVG T RH T F M  + +F     +D  ++ WT                
Sbjct: 70  RAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLTEVLKLPKERLCVT 129

Query: 165 --KTVEYCFELM-QRLGIDGKTITFI----------ESWWEGG--GNAGPCYEVI-THG- 207
             +T +  FE+  +++G+  + I  I          +++W+ G  G  GPC E+   HG 
Sbjct: 130 VYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGD 189

Query: 208 -----------------VELATLVFMQY-KKIGNDYEEIPLKIVDTGYGIERFAWASQGT 249
                            +E+  +VFMQY ++   +   +P   VDTG GIER A   QG 
Sbjct: 190 HIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAAIMQGV 249

Query: 250 PTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKVAEKIGM 309
            + YE                 ++   ++A++A + G+ D+ N   LRV           
Sbjct: 250 HSNYEI----------------DIFRALIAKAAEIIGVTDLSNKS-LRV----------- 281

Query: 310 DVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRYMEKIGI 369
                            IADH R  +F+  DG++PSN   GY+ R ++R+ +R+  K+G 
Sbjct: 282 -----------------IADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRAVRHGNKLGA 324

Query: 370 SMSI-KDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVERMAASKS 428
           + +    ++   +E M +    L+  +  +   L AEE+++ +T+ RG GI++       
Sbjct: 325 TEAFFYKLVPTLIEVMGDAAKGLADTQVIVEKALKAEEEQFARTLERGLGILDSALNELQ 384

Query: 429 EITLDD--LIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAERHEEEKP- 485
             TLD   + +LYD+ G P ++  DV  + N        I     F   +AE+    +  
Sbjct: 385 GDTLDGETVFKLYDTYGFPVDLTADVCRERN-------IIVDEAGFEVAMAEQRSRAQAA 437

Query: 486 -----EEVVSTKKELPELEVSKTELLFFKHPTQVEFEAKVLKIV----EKYVVLDKTLFY 536
                +   + K +        +EL      T +    + +  +    +  VVLD T FY
Sbjct: 438 GNFGADYNAALKIDAETAFCGYSELTGNAKVTALYLNGESVSAISAGDDAVVVLDVTPFY 497

Query: 537 AEGGGQKYDIGQLN----DIEVMDVQKKNGIVFHKVS-DISKFKEGDTVKGAVNWDNRLK 591
           AE GGQ  D G L     +  V D QK      HK +        G  ++  V+   R +
Sbjct: 498 AESGGQVGDKGVLVAQGIEFAVSDTQKFGQASGHKGTLTAGSLSVGQVLEAKVDKKLRHR 557

Query: 592 LMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERISREQVKEIERIANEI 651
              NH+ TH+++AA  +VLG HV Q GS VD E+ R D +H+E +   ++K++E + N  
Sbjct: 558 TQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQ 617

Query: 652 VLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEGTDVEACGGTHCSNTSEC 711
           +     +    M  ++A++K    ++  G      +R++ +    +E CGGTH   T + 
Sbjct: 618 IRRNHELKVAEMAIDEAKEKGAMALF--GEKYDAQVRVVTMGDFSIELCGGTHVGRTGDI 675

Query: 712 GYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDSAEILGIPNDQLPKTVKRFFE 771
           G  K+     I  GV R+E  TG  +++ +A  +  L ++A +L      +   +K   +
Sbjct: 676 GLFKITSEGGIAAGVRRIEAVTGAAAMAYVAQQQAQLEEAAALLKGDTQSVVAKLKAQLD 735

Query: 772 EWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSGT-PNELMSIADNLAVGN 830
           + K+ +K +++L+ K+      +LA     V    VL++++ G     L  + D L    
Sbjct: 736 KMKQLEKDMQQLKDKLAAAASADLAGDAVVVNGVNVLIKKLEGVEAGALRGLQDELKQKL 795

Query: 831 KLIVLM--------------NENDYL-LCKRGENVELSMKDLIRNIGKGGGKDNLAQ--G 873
           K  V++                ND +   K GE V +    +    GKGGG+ ++AQ  G
Sbjct: 796 KSAVILLGVAQEGKVNLIAGVSNDLVGKVKAGELVAMVAAQV---GGKGGGRPDMAQAGG 852

Query: 874 KYSENKEQITEKII 887
              EN +    +++
Sbjct: 853 SQPENLDAALSQVL 866