Pairwise Alignments

Query, 54 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 410 a.a., periplasmic Fe hydrogenase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.8 bits (112), Expect = 7e-11
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 1  MKVNYSKCGYCGACVGVCKSMAIELIENKLY-IEEEKCNNCKLCTVVCPVNALEE 54
          +K+N SKC  C AC   C + AI      ++ I+E+KC +C  C + CP +A+EE
Sbjct: 15 IKINASKCKGCDACKQFCPTHAINGASGAVHSIDEDKCLSCGQCLINCPFSAIEE 69



 Score = 26.2 bits (56), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 26 IENKLYIEEEKCNNCKLCTVVCPVNAL 52
          I+  + I   KC  C  C   CP +A+
Sbjct: 11 IQGLIKINASKCKGCDACKQFCPTHAI 37