Pairwise Alignments

Query, 390 a.a., NAD(P)/FAD-dependent oxidoreductase from Methanococcus maripaludis S2

Subject, 413 a.a., Geranylgeranyl reductase (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 44/328 (13%)

Query: 8   YDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RLEDFGINPDPS 65
           +DVVVVG GPAG+ A+ + ++ G +  L++     G P  C  A+P   + +F I  D  
Sbjct: 14  FDVVVVGGGPAGATAATDLARAGRRVALLDPE---GRPKPCGGAIPPRLMSEFAIPDD-- 68

Query: 66  FVKSYIRGGYLIAPNGKKIVVKGGKTDGYVVERKVFDKFLAIRSGQAGTQIAVKSRVTKI 125
              + + G   +AP+G+ + +        +V+R VFD +L  R+ QAG    +  R    
Sbjct: 69  LPCAQVSGARALAPSGRVVDMPITGAVVSMVDRAVFDPWLRARAHQAGA-CRLHGRFEGF 127

Query: 126 EKTDDGYNVFVNYLGDEYIVKSKI----VIAADGVESNIAEYAGLKSKKNPKEICSCAEY 181
           ++ +DG  V V +  +   V ++I    V+ ADG  S +A  A +     P   C  A +
Sbjct: 128 DRQEDGALV-VLWRPEGAAVANRIVARYVVGADGARSKVAALA-VAGAAPP---CVAAYH 182

Query: 182 EMTNVKLLNNEMME-----------------FYFGDICPKGYIWLFPKGDTVNVGIGVI- 223
           E+                              Y GDI P  Y W+FP G+T+++G G   
Sbjct: 183 EIIRAPAAPAASAPTPATAAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGTAV 242

Query: 224 --DSKKRAIDYLDEFLTHPLVEGRLDNAVPVEFKVGGDPVGGPIKKTVADNIMVVGDAAG 281
              S + A+  L         E  LD    V  +    P+    +     +++++GDAAG
Sbjct: 243 KGFSLREAVALLRR-------EAGLDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAG 295

Query: 282 HVSPLTGGGIGLSMDCGLMAGDVAAQSI 309
            V+P +G GI  +M  G MA +   +++
Sbjct: 296 VVAPASGEGIYYAMASGKMAAEALGEAL 323