Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 907 a.a., ABC-type multidrug transport system, permease component from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 4e-22
 Identities = 106/477 (22%), Positives = 191/477 (40%), Gaps = 60/477 (12%)

Query: 73  EELTDDRIVHSYGQN-RFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLT 131
           E L    + H YGQ           P     GL+GP+G GKS+++  ++G   L    L 
Sbjct: 7   EALRASGLEHRYGQQVALSDIAFSLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQHGQLD 66

Query: 132 ETPDMKKVLDYFSGTELQNYFEKLKNNGIKPI-HKPQ------YVDVLPKVVKGKVGEL- 183
                        G  + +   + +N   + I   PQ      Y D+  +      G L 
Sbjct: 67  VL-----------GASIDD--RRHRNTLYRRIAFMPQGLGGNLYPDLSIRENIRFFGTLF 113

Query: 184 -LKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSW 242
            L + D +     ++ A ++    DR   +LSGG  Q++ +  A + E D+   DEPT+ 
Sbjct: 114 GLSRADCEQRMGTLLLATDLQRFADRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTG 173

Query: 243 LDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIH---------IMYGIPSAYGV 293
           +D   R    ++I +V   +  + +      ++    + H         I  G+ +    
Sbjct: 174 VDPLSRRRFWELIEDVRRQRPQLTLLVATAYMEEAEQFEHCLMLDNGRLIAKGLSAELAT 233

Query: 294 VTHPRGTRVGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDF 353
           VT P G      T+  G    +       P+V    PP+ +    + ++  D++ + GDF
Sbjct: 234 VT-PDGKLDSAFTHFQGDSGRD-----VEPLVI---PPRSANTADIAIEAHDLTLRFGDF 284

Query: 354 -SLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV--------TGDVKVSY 404
            +++     I +GE+ G LG NG GKTT +K L G+I    G            D+    
Sbjct: 285 TAVDKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLIPASEGSARLLGNPVNAKDLATRK 344

Query: 405 KPQYISSDFEGTVEDLLMSITAIHTSYYK----------SEIIKPLALENILDSSVKDLS 454
           +  ++S  F    E        +H   +            E+I+   L+ + D     L 
Sbjct: 345 RVGFMSQSFSLYGELSARQNLELHAKLFDLPTTDSRQRIDELIQRFNLQALADQPSGALP 404

Query: 455 GGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDH 511
            G  QR+S+A  +    ++ ++DEP++ +D   R    R++  ++ E+   +F+  H
Sbjct: 405 LGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLIELSREQGVTIFLSTH 461