Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 263 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 27/234 (11%)

Query: 366 EVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDV-------------KVSYKPQYISSD 412
           +V  ++GPNG GK+T +KA A +++P +G ++ D              KV++ PQ +   
Sbjct: 30  QVTALIGPNGCGKSTLLKAFARILTPQAGSLSLDGTAYGKLSANELARKVAFLPQVLPIP 89

Query: 413 FEGTVEDLLMSITAIHTSYYK----------SEIIKPLALENILDSSVKDLSGGELQRVS 462
              +V  L+    + H S +            + ++ + L+ + +  + DLSGG+ QR  
Sbjct: 90  EGVSVRQLVAYGRSPHNSLWGRLSGADQHSVDQALQRMELDTLAERPLSDLSGGQRQRAW 149

Query: 463 IAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDR 522
           +A  L+QDA + L+DEP+ +LD+  ++    ++R ++ E +  + V+ HDI      +D 
Sbjct: 150 LAMILAQDAAIVLLDEPTTYLDISHQVELLDLMRELSAEGKTVITVL-HDINQACRYADH 208

Query: 523 FIVF-SGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRDPDTGRPRVNKEGSQR 575
             V   G   + G  S+ L        F  ++ +   R+P  G P    E S R
Sbjct: 209 LAVMQGGRMVTCGAPSDVLTAELVCQVF--DVQVQIMREPVAGTPMCIVERSTR 260



 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)

Query: 97  PRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLK 156
           P   VT L+GPNG GKST++KA +  +      L+        L   S  EL      L 
Sbjct: 27  PPAQVTALIGPNGCGKSTLLKAFARILTPQAGSLSLDGTAYGKL---SANELARKVAFLP 83

Query: 157 NNGIKPIHKPQYVDVLPKVVKGKV--GELLKKVD--EKGEFEKIINALEISNILDRTFDQ 212
              + PI  P+ V V   V  G+     L  ++   ++   ++ +  +E+  + +R    
Sbjct: 84  Q--VLPI--PEGVSVRQLVAYGRSPHNSLWGRLSGADQHSVDQALQRMELDTLAERPLSD 139

Query: 213 LSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREV-AEGKKVVAVEHDL 271
           LSGG+ QR  +A    ++  I   DEPT++LD+  +     ++RE+ AEGK V+ V HD+
Sbjct: 140 LSGGQRQRAWLAMILAQDAAIVLLDEPTTYLDISHQVELLDLMRELSAEGKTVITVLHDI 199

Query: 272 IVLDYLSDYIHIMYG 286
                 +D++ +M G
Sbjct: 200 NQACRYADHLAVMQG 214