Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 613 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 89.4 bits (220), Expect = 4e-22
 Identities = 112/486 (23%), Positives = 198/486 (40%), Gaps = 79/486 (16%)

Query: 101 VTGLLGPNGVGKSTIIKAL-----------SGEMVLNLNDLTETPDMKKVLDYFSGTELQ 149
           V  L+G +G GK+TI  AL            G + +  +D+   P+ +  L    G  + 
Sbjct: 36  VLALIGESGSGKTTIALALLGYARRGCKLAGGVVQVGAHDMLSLPESQ--LQGLRGNRV- 92

Query: 150 NYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFE----KIINALEISN- 204
           +Y  +       P  K     ++ +V++G    L+  +  + E E    ++   L + N 
Sbjct: 93  SYIAQSAAAAFNPAKK-----LIDQVIEGA---LIHGLGSRAELEAKAVELFRDLALPNP 144

Query: 205 --ILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVA--E 260
             I  R   Q+SGG+LQRV  A A + +  +   DEPT+ LDV  +    +  + V    
Sbjct: 145 ESIGRRYPHQVSGGQLQRVMAAMALISDPLLVILDEPTTALDVTTQIDVLRAFKRVVRDR 204

Query: 261 GKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFR 320
           G   V V HDL V+  ++D I ++ G     G +     T   +   +D + +      R
Sbjct: 205 GATAVYVSHDLAVVAQMADQIVVLNG-----GRIIEQSSTAALLKGPVDAYSRSLLAAAR 259

Query: 321 KSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGG-----------QIYQGEVVG 369
              ++    P  +      LL    ++   G    N+ G             I +G+ +G
Sbjct: 260 PDKVL---SPASEVVKDSTLLTIKGLTAGYG--KKNLQGMPMIRVLEDIDLTIRRGQAIG 314

Query: 370 ILGPNGIGKTTFVKALAGVISPDSGEVT-----------GDVKVSYKPQYISSDFEGTVE 418
           ++G +G GK+T  + +AG++ P  G +T           G  +  ++   +      T  
Sbjct: 315 VIGESGSGKSTLARVVAGLLDPAHGSLTFDGADLSGTLAGRTEEQFRRIQMVFQNADTAL 374

Query: 419 DLLMSITAIHTSYYKSEI-IKPLALENILDSSV--------------KDLSGGELQRVSI 463
           + + SI+AI     K    +K  AL   +D  +               +LSGG+ QRV++
Sbjct: 375 NPMHSISAILARPLKMYFGLKGRALRERIDELMDLVRLPRELAERRPNELSGGQKQRVNL 434

Query: 464 AACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRF 523
           A  L+   DL L DE ++ LD         ++  +  +   +   + HDI     + D  
Sbjct: 435 ARALAAKPDLILCDEVTSALDTVVGACILELLGELRRKLGVSYLFISHDISTVRALCDDI 494

Query: 524 IV-FSG 528
           +V +SG
Sbjct: 495 VVMYSG 500



 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)

Query: 364 QGEVVGILGPNGIGKTTFVKALAG-------------------VISPDSGEVTG--DVKV 402
           +GEV+ ++G +G GKTT   AL G                   ++S    ++ G    +V
Sbjct: 33  KGEVLALIGESGSGKTTIALALLGYARRGCKLAGGVVQVGAHDMLSLPESQLQGLRGNRV 92

Query: 403 SYKPQYISSDFEGTVE--DLLMSITAIHTSYYKS-------EIIKPLAL---ENILDSSV 450
           SY  Q  ++ F    +  D ++    IH    ++       E+ + LAL   E+I     
Sbjct: 93  SYIAQSAAAAFNPAKKLIDQVIEGALIHGLGSRAELEAKAVELFRDLALPNPESIGRRYP 152

Query: 451 KDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVD 510
             +SGG+LQRV  A  L  D  L ++DEP+  LDV  ++   R  +R+  ++ A    V 
Sbjct: 153 HQVSGGQLQRVMAAMALISDPLLVILDEPTTALDVTTQIDVLRAFKRVVRDRGATAVYVS 212

Query: 511 HDILFQDYISDRFIVFSG 528
           HD+     ++D+ +V +G
Sbjct: 213 HDLAVVAQMADQIVVLNG 230



 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 12/195 (6%)

Query: 98  RDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLT-ETPDMKKVLDYFSGTELQNYFEKLK 156
           R    G++G +G GKST+ + ++G +      LT +  D+   L   +  + +      +
Sbjct: 309 RGQAIGVIGESGSGKSTLARVVAGLLDPAHGSLTFDGADLSGTLAGRTEEQFRRIQMVFQ 368

Query: 157 N--NGIKPIHKPQYVDVLP-KVVKGKVGELLK-KVDEKGEFEKIINALEISNILDRTFDQ 212
           N    + P+H    +   P K+  G  G  L+ ++DE  +  ++   L      +R  ++
Sbjct: 369 NADTALNPMHSISAILARPLKMYFGLKGRALRERIDELMDLVRLPRELA-----ERRPNE 423

Query: 213 LSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAE--GKKVVAVEHD 270
           LSGG+ QRV +A A   + D+   DE TS LD        +++ E+    G   + + HD
Sbjct: 424 LSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACILELLGELRRKLGVSYLFISHD 483

Query: 271 LIVLDYLSDYIHIMY 285
           +  +  L D I +MY
Sbjct: 484 ISTVRALCDDIVVMY 498