Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 636 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score = 83.2 bits (204), Expect = 3e-20
 Identities = 111/477 (23%), Positives = 186/477 (38%), Gaps = 62/477 (12%)

Query: 103 GLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKP 162
           GL+G NG GKS++   L GE+  +  D     D +          L+        +G + 
Sbjct: 31  GLIGANGAGKSSLFALLRGELTPDAGDCLLPADWRIAHMRQEVDTLERLAVDYVLDGDER 90

Query: 163 IHKPQYVDVLPKVVKGKVGE--LLKKVDEKGEF------EKIINALEISNI-LDRTFDQL 213
           + + Q      +  +    +  L  ++D    +       K++  L  +N  ++R     
Sbjct: 91  LREVQSSLAEAEAAQDGAAQARLHSELDSADGYTADARARKLLAGLGFTNEQMERQVGSF 150

Query: 214 SGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIV 273
           SGG   R+ +A A +   D+   DEPT+ LD+         ++       ++ + HD   
Sbjct: 151 SGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKSYPG--TLLLISHDRDF 208

Query: 274 LDYLSDYI-HIMYG----IPSAYGVVTHPRGTRVG---------------INTYLDGF-- 311
           LD + D+I H+           Y      R  R+                +  Y+  F  
Sbjct: 209 LDAVVDHIAHVEQRRITLYRGGYSAFERARAERLAQQQQAYEKQQAQRAHMEKYIARFKA 268

Query: 312 -----------------LKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFS 354
                            ++E +     SP  F  R   D  + PLL D +D     GD +
Sbjct: 269 QATKARQAQSRIKALERMEELSAAHVDSPFNFVFRE-SDKISSPLL-DLSDARLGYGDKT 326

Query: 355 -LNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVT--GDVKVSYKPQYISS 411
            L     Q+  G  +G+LGPNG GK+T +K LAG + P SG +    ++ V Y  Q+   
Sbjct: 327 ILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAGELEPQSGRLVRGENLTVGYFAQHQLD 386

Query: 412 DFEGTVEDL--LMSITAIHTSYYKSEIIKPLALENI-LDSSVKDLSGGELQRVSIAACLS 468
             +     L  L  +          + +         LD  V + SGGE  R+++A    
Sbjct: 387 SLDAKATPLLHLQRLAPTEREQTLRDFLGGFDFRGARLDEPVLNFSGGEKARLALALIAW 446

Query: 469 QDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIV 525
           +  +L L+DEP+  LD+E RL  +  ++    E   A+ VV HD       +D F++
Sbjct: 447 EKPNLLLLDEPTNHLDLEMRLALTMALQ----EFGGAVLVVSHDRHLLKSTTDDFLL 499



 Score = 46.2 bits (108), Expect = 4e-09
 Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 41/196 (20%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGE--VTGDVKVSYKPQYISSDFEGTVED 419
           ++ G   G++G NG GK++    L G ++PD+G+  +  D ++++  Q + +  E    D
Sbjct: 24  LHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLLPADWRIAHMRQEVDT-LERLAVD 82

Query: 420 LLMS----ITAIHTSYYKSEIIKPLA----LENILDSS---------------------- 449
            ++     +  + +S  ++E  +  A    L + LDS+                      
Sbjct: 83  YVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSADGYTADARARKLLAGLGFTNEQ 142

Query: 450 ----VKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAA 505
               V   SGG   R+++A  L   +DL L+DEP+  LD++  L     ++         
Sbjct: 143 MERQVGSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDWLK----SYPGT 198

Query: 506 MFVVDHDILFQDYISD 521
           + ++ HD  F D + D
Sbjct: 199 LLLISHDRDFLDAVVD 214