Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 543 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  101 bits (251), Expect = 9e-26
 Identities = 114/468 (24%), Positives = 192/468 (41%), Gaps = 61/468 (13%)

Query: 101 VTGLLGPNGVGKSTI-IKALS----------GEMVLNLNDLTETPDMKKVLDYFSGTELQ 149
           V GL+G +G GKSTI + AL+          GE++LN  D+ +    +  ++   G  + 
Sbjct: 41  VLGLIGESGAGKSTIGLSALAYGRGGCRITGGEVLLNGRDILKLG--RGGINSVRGRHVC 98

Query: 150 NYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGE----FEKIINALEISNI 205
            Y  +       P HK     +  +V++  +   +   DE  +      +++        
Sbjct: 99  -YVAQSAAAAFNPAHK-----LGDQVIEASLRHGIMNRDEATKRALYLFRVLGLPNPETF 152

Query: 206 LDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVV 265
            DR   Q+SGG+LQR   A A     ++  FDEPT+ LDV  +      I+   E     
Sbjct: 153 GDRYPHQVSGGQLQRAMTAMALCPNPELIVFDEPTTALDVTTQIDVLAAIKHAIEETDTA 212

Query: 266 A--VEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFRKSP 323
           A  + HDL V+  +SD I           V+ H +    G    +    +EE  R   S 
Sbjct: 213 ALYITHDLAVVAQISDDIM----------VLRHGKTVEYGTTKQVIEAPREEYTRALVSV 262

Query: 324 IVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVK 383
              ++    D T+  L +++       G   L+     + +G+ + I+G +G GK+T  +
Sbjct: 263 RQAKRDEAPDQTDTLLKIEHVHAGYANGFKVLHDVSMHLPKGQTLAIVGESGSGKSTLAR 322

Query: 384 ALAGVISPDSGEVTGDVKVSYKPQ--------------YISSDFEGTVEDLLMSITAIHT 429
            + G++ P  G +T + K   K                Y  +D        +  I     
Sbjct: 323 VITGLLPPSEGRITFEGKELPKALKGRTNDELRRIQMIYQMADTAMNPRQTVREIVGRPL 382

Query: 430 SYY-------KSEIIKPLALE-----NILDSSVKDLSGGELQRVSIAACLSQDADLYLID 477
           S+Y       K+E +K L  +       LD    +LSGG+ QRV+IA  L+   +L L D
Sbjct: 383 SFYFGMHGAKKTERVKELLDQIEMGTRFLDRYPAELSGGQKQRVAIARALAAKPELILCD 442

Query: 478 EPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIV 525
           EP++ LD         ++ ++ +E   +   + HDI     I+D   V
Sbjct: 443 EPTSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAIVRAIADSVAV 490



 Score = 55.5 bits (132), Expect = 6e-12
 Identities = 51/214 (23%), Positives = 108/214 (50%), Gaps = 13/214 (6%)

Query: 81  VHSYGQNRFRLYGLIT---PRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLT-ETPDM 136
           VH+   N F++   ++   P+     ++G +G GKST+ + ++G +  +   +T E  ++
Sbjct: 283 VHAGYANGFKVLHDVSMHLPKGQTLAIVGESGSGKSTLARVITGLLPPSEGRITFEGKEL 342

Query: 137 KKVLDYFSGTELQNY--FEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFE 194
            K L   +  EL+      ++ +  + P  +    +++ + +    G    K  E+   +
Sbjct: 343 PKALKGRTNDELRRIQMIYQMADTAMNP--RQTVREIVGRPLSFYFGMHGAKKTER--VK 398

Query: 195 KIINALEI-SNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAK 253
           ++++ +E+ +  LDR   +LSGG+ QRVAIA A   + ++   DEPTS LD         
Sbjct: 399 ELLDQIEMGTRFLDRYPAELSGGQKQRVAIARALAAKPELILCDEPTSALDPLVAEGILN 458

Query: 254 VIREVAEGKKV--VAVEHDLIVLDYLSDYIHIMY 285
           ++ ++ E   V  V + HD+ ++  ++D + +M+
Sbjct: 459 LLLKLQEETAVSYVFITHDIAIVRAIADSVAVMH 492



 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 33/197 (16%)

Query: 362 IYQGEVVGILGPNGIGKTTF-VKALA---GVISPDSGEV-----------TGDVK----- 401
           + +G+V+G++G +G GK+T  + ALA   G      GEV            G +      
Sbjct: 36  LQKGKVLGLIGESGAGKSTIGLSALAYGRGGCRITGGEVLLNGRDILKLGRGGINSVRGR 95

Query: 402 -VSYKPQYISSDFEGT--VEDLLMSITAIHTSYYKSEIIK-PLALENIL---------DS 448
            V Y  Q  ++ F     + D ++  +  H    + E  K  L L  +L         D 
Sbjct: 96  HVCYVAQSAAAAFNPAHKLGDQVIEASLRHGIMNRDEATKRALYLFRVLGLPNPETFGDR 155

Query: 449 SVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFV 508
               +SGG+LQR   A  L  + +L + DEP+  LDV  ++     I+   +E + A   
Sbjct: 156 YPHQVSGGQLQRAMTAMALCPNPELIVFDEPTTALDVTTQIDVLAAIKHAIEETDTAALY 215

Query: 509 VDHDILFQDYISDRFIV 525
           + HD+     ISD  +V
Sbjct: 216 ITHDLAVVAQISDDIMV 232