Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 529 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score = 92.4 bits (228), Expect = 4e-23
 Identities = 116/473 (24%), Positives = 199/473 (42%), Gaps = 72/473 (15%)

Query: 101 VTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEK----LK 156
           V GL+G +G GKSTI  A+ G     +        ++     FSG EL    ++    ++
Sbjct: 36  VLGLIGESGAGKSTIGLAILGHCRQGMR-------IQSGRITFSGQELTQLSDRQLRQVR 88

Query: 157 NNGIKPIHKPQYVDVLPKVVKGKV---GELLKKVDEKGEFE-KIINALEISNILD----- 207
              I  + +       P +  G+      L  KV  + + + K I   E   + D     
Sbjct: 89  GRQIAYVAQSAGAAFNPAITLGEQVIEAALKHKVYPRQQAQAKAIALFEQLGLPDPQAFY 148

Query: 208 -RTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAE--GKKV 264
            R   Q+SGG+LQR  IA A     ++  FDEPT+ LDV  +    K I +V    G   
Sbjct: 149 QRYPHQVSGGQLQRAMIAMALCAGPELLIFDEPTTALDVTTQLGVLKAISDVIRFSGVAA 208

Query: 265 VAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFRKSPI 324
           + + HDL V+  +SD  HIM        V+ H +         L    +++  R      
Sbjct: 209 IYISHDLAVVAQISD--HIM--------VLQHGKTVEQAETAQLLSQPQQDYTRRLLHAQ 258

Query: 325 VFEKRPPQDSTNRPLLLDYTDISKK------LGDFSLNVNGGQIYQGEVVGILGPNGIGK 378
              K P   + + P+ LD  +IS +      L + SL++      +G  + ++G +G GK
Sbjct: 259 GGSKTP--QTGDAPVALDIRNISARYHAQPVLQNISLSLP-----RGRTLAVIGESGSGK 311

Query: 379 TTFVKALAGVISPDSGEVT------------------GDVKVSYKPQYISSDFEGTVEDL 420
           +T  K + G+++P +GEV+                   DV++ ++    + + +  +   
Sbjct: 312 STLGKVICGLLTPQTGEVSLNQQVLPASLRQRSRVQLRDVQLIHQIPDTALNPKERIGSQ 371

Query: 421 LMSITAIHTSYYK-------SEIIKPLALENILDSSV-KDLSGGELQRVSIAACLSQDAD 472
           +  + A  TS  +       SE++  + L   L       LSGG+ QRV IA  L+ +  
Sbjct: 372 ISRVLACFTSLNRSQREARVSELLAQVGLHAELAMRFPAALSGGQKQRVCIARALAAEPK 431

Query: 473 LYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIV 525
           + + DEP++ LD         ++R++  E   A   + HD+     ++D   V
Sbjct: 432 IIVCDEPTSALDPLVARDVLALLRQIQQETGIAYLFITHDLQVVREVADEVAV 484



 Score = 51.6 bits (122), Expect = 8e-11
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 33/197 (16%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAG----VISPDSGEVT-----------------GDV 400
           + QGEV+G++G +G GK+T   A+ G     +   SG +T                    
Sbjct: 31  VKQGEVLGLIGESGAGKSTIGLAILGHCRQGMRIQSGRITFSGQELTQLSDRQLRQVRGR 90

Query: 401 KVSYKPQYISSDFEG--TVEDLLMSITAIHTSYYKSEI-IKPLAL---------ENILDS 448
           +++Y  Q   + F    T+ + ++     H  Y + +   K +AL         +     
Sbjct: 91  QIAYVAQSAGAAFNPAITLGEQVIEAALKHKVYPRQQAQAKAIALFEQLGLPDPQAFYQR 150

Query: 449 SVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFV 508
               +SGG+LQR  IA  L    +L + DEP+  LDV  +L   + I  +      A   
Sbjct: 151 YPHQVSGGQLQRAMIAMALCAGPELLIFDEPTTALDVTTQLGVLKAISDVIRFSGVAAIY 210

Query: 509 VDHDILFQDYISDRFIV 525
           + HD+     ISD  +V
Sbjct: 211 ISHDLAVVAQISDHIMV 227



 Score = 45.1 bits (105), Expect = 7e-09
 Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)

Query: 94  LITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKV-LDYFSGTELQNY- 151
           L  PR     ++G +G GKST+ K + G +     +++    +    L   S  +L++  
Sbjct: 293 LSLPRGRTLAVIGESGSGKSTLGKVICGLLTPQTGEVSLNQQVLPASLRQRSRVQLRDVQ 352

Query: 152 -FEKLKNNGIKPIHKPQYVDVLPKVV-----------KGKVGELLKKVDEKGEFEKIINA 199
              ++ +  + P  K +    + +V+           + +V ELL +V    E      A
Sbjct: 353 LIHQIPDTALNP--KERIGSQISRVLACFTSLNRSQREARVSELLAQVGLHAELAMRFPA 410

Query: 200 LEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVA 259
                        LSGG+ QRV IA A   E  I   DEPTS LD         ++R++ 
Sbjct: 411 A------------LSGGQKQRVCIARALAAEPKIIVCDEPTSALDPLVARDVLALLRQIQ 458

Query: 260 E--GKKVVAVEHDLIVLDYLSDYIHIM 284
           +  G   + + HDL V+  ++D + ++
Sbjct: 459 QETGIAYLFITHDLQVVREVADEVAVL 485