Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 640 a.a., ATPase component of ABC transporters with duplicated ATPase domain from Dechlorosoma suillum PS

 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 113/491 (23%), Positives = 213/491 (43%), Gaps = 76/491 (15%)

Query: 104 LLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTEL----QNYFEKLKNN- 158
           L+G NG GKS+++KAL+G+  L+  ++   P  +  + Y          Q+ F+ +    
Sbjct: 34  LIGRNGCGKSSLLKALAGQGGLDDGEVWRQPGAR--IGYVPQEPPFDPEQSVFQAVVGGM 91

Query: 159 GIKPIHKPQYVDVLPK---------VVKGKVGELLKKVDEKGEFEKIINALEISNILDRT 209
           G       +Y +V  +         V+  ++ +L   ++ +G +   +NA   + I   +
Sbjct: 92  GDTSALLAEYHEVSHRLADEGADHEVLLARLHQLQTDLEARGAWA--VNAQAEAAIQRFS 149

Query: 210 FDQ------LSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKK 263
            D       LSGG+ +R+A+A A     ++   DEPT+ LDV        ++ E      
Sbjct: 150 LDPEARVGGLSGGQKKRLALAQALAVAPEVLLLDEPTNHLDVGAIAWLENLLLEA--NVT 207

Query: 264 VVAVEHDLIVLDYLSDYI-----HIMYGIPSAYGVVTHPRGTRVG----INTYLDGFLKE 314
           ++ + HD   L+ L+  I       +   P  +      +   +     +N   D FL +
Sbjct: 208 LLFITHDRAFLNRLATRIVELDRGQLVSFPGNFAAYQERKERMLADEAVVNAKFDKFLAQ 267

Query: 315 ENIRFRKSP-----------IVFEKRPPQDSTNRP-----------------LLLDYTDI 346
           E +  RK             +  E+   + +  R                  L+ + T +
Sbjct: 268 EEVWIRKGVEARRTRNEGRVLRLEQLRRERAARRERQGKVELALDSGEKSGKLVAELTHV 327

Query: 347 SKKLGDFSLNVN-GGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVT--GDVKVS 403
           +K+ G+ ++  +   ++ +G+ +G++GPNG GKTT ++ + G + PD G V     V+V+
Sbjct: 328 TKRYGERTIVRDFSTRLMRGDKIGLIGPNGAGKTTLLRLILGELQPDEGSVRQGTKVEVA 387

Query: 404 YKPQYISS-DFEGTVEDLLM-SITAIHTSYYKSEIIKPLA----LENILDSSVKDLSGGE 457
           Y  Q+ S  D E  + D++      +     K  +I  L           S VK LSGGE
Sbjct: 388 YFDQFRSQLDEEAALADVISPGSDYVEIGNEKKHVISYLGDFLFAPQRARSPVKSLSGGE 447

Query: 458 LQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQD 517
             R+ +A   ++ A++ ++DEP+  LD+E    T  ++ ++  +    +F+V HD  F D
Sbjct: 448 RNRLLLARLFARPANVLVLDEPTNDLDIE----TLELLEQLLQDYPGTLFLVSHDRAFLD 503

Query: 518 YISDRFIVFSG 528
            +  + I   G
Sbjct: 504 NVVTQTIAAEG 514



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 50/208 (24%)

Query: 361 QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV--TGDVKVSYKPQYISSDFEGTVE 418
           Q+  GE V ++G NG GK++ +KALAG    D GEV      ++ Y PQ    D E +V 
Sbjct: 25  QLDPGERVALIGRNGCGKSSLLKALAGQGGLDDGEVWRQPGARIGYVPQEPPFDPEQSVF 84

Query: 419 DLLM----SITAIHTSYYKSEIIKPLALENI----------------------------- 445
             ++      +A+   Y+  E+   LA E                               
Sbjct: 85  QAVVGGMGDTSALLAEYH--EVSHRLADEGADHEVLLARLHQLQTDLEARGAWAVNAQAE 142

Query: 446 ---------LDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIR 496
                     ++ V  LSGG+ +R+++A  L+   ++ L+DEP+  LDV         + 
Sbjct: 143 AAIQRFSLDPEARVGGLSGGQKKRLALAQALAVAPEVLLLDEPTNHLDV----GAIAWLE 198

Query: 497 RMADEKEAAMFVVDHDILFQDYISDRFI 524
            +  E    +  + HD  F + ++ R +
Sbjct: 199 NLLLEANVTLLFITHDRAFLNRLATRIV 226



 Score = 42.4 bits (98), Expect = 6e-08
 Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 29/209 (13%)

Query: 71  LPEELTDDRIVHSYGQNRF-RLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLND 129
           L  ELT   +   YG+    R +     R    GL+GPNG GK+T+++ + GE+      
Sbjct: 320 LVAELT--HVTKRYGERTIVRDFSTRLMRGDKIGLIGPNGAGKTTLLRLILGEL------ 371

Query: 130 LTETPDMKKVLDYFSGTELQ-NYFEKLKNNGIKPIHKPQYVDVL-PKVVKGKVGELLKKV 187
               PD   V     GT+++  YF++ ++   +   +    DV+ P     ++G   K V
Sbjct: 372 ---QPDEGSVR---QGTKVEVAYFDQFRS---QLDEEAALADVISPGSDYVEIGNEKKHV 422

Query: 188 -DEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVK 246
               G+F      L            LSGGE  R+ +A    R  ++   DEPT+ LD++
Sbjct: 423 ISYLGDF------LFAPQRARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIE 476

Query: 247 QRFSAAKVIREVAEGKKVVAVEHDLIVLD 275
                 +++++      +  V HD   LD
Sbjct: 477 TLELLEQLLQDYP--GTLFLVSHDRAFLD 503