Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 253 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis JJ

 Score = 87.0 bits (214), Expect = 8e-22
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 27/230 (11%)

Query: 361 QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGD-------------VKVSYKPQ 407
           ++ +GEVV ILG NG GK+T +K +  ++ P  G +T +              KV Y PQ
Sbjct: 24  EVEKGEVVSILGINGAGKSTLIKCINKILPPKKGTITVENLDVNKMDRLDLAKKVGYVPQ 83

Query: 408 YISSDFEGTVEDLLMSITAIHTSYYKSE--------IIKPLALENILDSSVKDLSGGELQ 459
             + ++  TV D L+     H  +  S+        ++K L LE     +  +LSGGELQ
Sbjct: 84  RSNGNYM-TVFDALLLGRKPHIKWEISKKDIEITENVLKLLDLEKYALRNTNELSGGELQ 142

Query: 460 RVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYI 519
           +V I   L Q+  L L+DEP+  LD++ +L   R+++ ++  +     +V HDI      
Sbjct: 143 KVIIGRALVQEPKLILLDEPTNNLDLKNQLEVMRILKDVSVSQNITSIIVMHDINLALRY 202

Query: 520 SDRFIVFS-----GIAGSSGTGSEPLQKRAGANKFLKEMGITFRRDPDTG 564
           SD+F++          G     S+ + +  G N ++  +       P+ G
Sbjct: 203 SDKFLMLKDGKIFAEGGKEIINSQNIMEVYGVNTYVHNLNGHLTIVPEEG 252



 Score = 70.5 bits (171), Expect = 8e-17
 Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 19/218 (8%)

Query: 101 VTGLLGPNGVGKSTIIKALSGEMVLNLNDLT-ETPDMKKVLDYFSGTELQNYFEKLKNNG 159
           V  +LG NG GKST+IK ++  +      +T E  D+ K +D     +   Y  +  N  
Sbjct: 30  VVSILGINGAGKSTLIKCINKILPPKKGTITVENLDVNK-MDRLDLAKKVGYVPQRSNGN 88

Query: 160 IKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGE--FEKIINALEISNILDRTFDQLSGGE 217
                   Y+ V   ++ G+   +  ++ +K     E ++  L++     R  ++LSGGE
Sbjct: 89  --------YMTVFDALLLGRKPHIKWEISKKDIEITENVLKLLDLEKYALRNTNELSGGE 140

Query: 218 LQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKV--VAVEHDL-IVL 274
           LQ+V I  A ++E  +   DEPT+ LD+K +    +++++V+  + +  + V HD+ + L
Sbjct: 141 LQKVIIGRALVQEPKLILLDEPTNNLDLKNQLEVMRILKDVSVSQNITSIIVMHDINLAL 200

Query: 275 DYLSDYIHIMYGIPSAYG---VVTHPRGTRV-GINTYL 308
            Y   ++ +  G   A G   ++       V G+NTY+
Sbjct: 201 RYSDKFLMLKDGKIFAEGGKEIINSQNIMEVYGVNTYV 238