Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis JJ

 Score = 84.0 bits (206), Expect = 8e-21
 Identities = 68/188 (36%), Positives = 90/188 (47%), Gaps = 23/188 (12%)

Query: 104 LLGPNGVGKSTIIKAL-------SGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLK 156
           LLGP+G GKS II+ +       SG++  N  D+TE P  K+   Y      QNY     
Sbjct: 30  LLGPSGAGKSVIIQCITGILKPDSGKIYFNGEDITEMPPEKRNFGYVP----QNYALFPN 85

Query: 157 NNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGG 216
            N    I          K+ K    E+ KKV E  EF      L IS+ILDR    LSGG
Sbjct: 86  MNVYNNIAYGM------KLRKYSKAEIEKKVMEISEF------LHISHILDRKPTTLSGG 133

Query: 217 ELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDY 276
           E QRVAIA A + +  I   DEPTS LD   + S    ++++ E   V+ + HD +    
Sbjct: 134 EQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGELVPVIHITHDFVEAKT 193

Query: 277 LSDYIHIM 284
           L + I I+
Sbjct: 194 LGNQIAIL 201



 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 370 ILGPNGIGKTTFVKALAGVISPDSGEV--TGDVKVSYKPQYISSDFEGTVEDLLMSITAI 427
           +LGP+G GK+  ++ + G++ PDSG++   G+      P+  +  +      L  ++   
Sbjct: 30  LLGPSGAGKSVIIQCITGILKPDSGKIYFNGEDITEMPPEKRNFGYVPQNYALFPNMNVY 89

Query: 428 HT--------SYYKSEIIKP-------LALENILDSSVKDLSGGELQRVSIAACLSQDAD 472
           +          Y K+EI K        L + +ILD     LSGGE QRV+IA  L  D  
Sbjct: 90  NNIAYGMKLRKYSKAEIEKKVMEISEFLHISHILDRKPTTLSGGEQQRVAIARALVLDPK 149

Query: 473 LYLIDEPSAFLDVEQRLTTSRVIRRMAD 500
           + L+DEP++ LD   + +    ++++ +
Sbjct: 150 ILLLDEPTSALDTNIKESVISELKKIGE 177