Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 260 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis JJ

 Score = 87.8 bits (216), Expect = 5e-22
 Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 35/230 (15%)

Query: 347 SKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVK----- 401
           +K L D S  ++ G      +  ILGPNG GK+T +K ++G++   SG +  D +     
Sbjct: 14  NKILNDCSFKLDSG------IGCILGPNGAGKSTILKCISGIVPVKSGSIIIDGEKTTQM 67

Query: 402 --------VSYKPQYISSDFEGTVEDLLMSITAIHTSYYK----------SEIIKPLALE 443
                   +SY PQ  S +F  TV ++++     H ++ +          +EI+K L + 
Sbjct: 68  NYKDRSRLISYSPQEFSINFPYTVFEVVLMGRNPHVNFLRGPSKKDEQKVTEILKLLKIS 127

Query: 444 NILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKE 503
           ++ D     LSGG+ + V +A  L QDA L + DEP++FLD + +     VI +++ E +
Sbjct: 128 HLKDKEFISLSGGQKRLVMVATALIQDAKLMIFDEPTSFLDYKNQYLVLSVIEKISKEMD 187

Query: 504 AAMFVVDHD----ILFQD--YISDRFIVFSGIAGSSGTGSEPLQKRAGAN 547
             + +  HD     LF D  ++     + S IA  +    E  Q+  G N
Sbjct: 188 KTVLLSLHDPNLAFLFCDNLFLMKNGKILSEIADKNSVCPENFQELYGIN 237



 Score = 77.4 bits (189), Expect = 6e-19
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 9/214 (4%)

Query: 75  LTDDRIVHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETP 134
           L  + I  +YG+N+           G+  +LGPNG GKSTI+K +SG + +    +    
Sbjct: 2   LNIENINFNYGKNKILNDCSFKLDSGIGCILGPNGAGKSTILKCISGIVPVKSGSIIIDG 61

Query: 135 DMKKVLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFE 194
           +    ++Y   + L +Y  +  +     I+ P  V  +  + +      L+   +K E +
Sbjct: 62  EKTTQMNYKDRSRLISYSPQEFS-----INFPYTVFEVVLMGRNPHVNFLRGPSKKDEQK 116

Query: 195 --KIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAA 252
             +I+  L+IS++ D+ F  LSGG+ + V +A A +++  +  FDEPTS+LD K ++   
Sbjct: 117 VTEILKLLKISHLKDKEFISLSGGQKRLVMVATALIQDAKLMIFDEPTSFLDYKNQYLVL 176

Query: 253 KVIREVAE--GKKVVAVEHDLIVLDYLSDYIHIM 284
            VI ++++   K V+   HD  +     D + +M
Sbjct: 177 SVIEKISKEMDKTVLLSLHDPNLAFLFCDNLFLM 210