Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 640 a.a., ABC transporter ATPase component (RefSeq) from Shewanella sp. ANA-3

 Score =  100 bits (249), Expect = 2e-25
 Identities = 124/499 (24%), Positives = 212/499 (42%), Gaps = 113/499 (22%)

Query: 104 LLGPNGVGKSTIIKALSGEMVLN-----------LNDLTETP---DMKKVLDYFS----- 144
           ++G NG GKS+++K LSG+++L+           ++ L + P   +   V  Y +     
Sbjct: 34  IVGRNGAGKSSLLKILSGDVLLDEGEFNIDGSVTVSRLQQDPPKAEQGSVYSYIAAGLKE 93

Query: 145 -GTELQNYFEKLKNNGIKPIHKPQYVDV-LPKVVKGKVGELLKKVDEKGEFEKIINALEI 202
            G  L+ Y +          H   Y +  L + +  ++ +L + +D    ++      + 
Sbjct: 94  VGEALEQYHQLS--------HDVAYAEPELMERMLNQMQKLQETLDHHNGWQLDSRIKQN 145

Query: 203 SNIL----DRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREV 258
             +L    D++  +LSGG  ++VA+A A + E D+   DEPT+ LD+       K + + 
Sbjct: 146 CELLGLDPDKSLSELSGGWQRKVALARALVSEPDLLLLDEPTNHLDIDTIEWLEKFLLDF 205

Query: 259 AEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIR 318
                +V + HD   +  ++  I     +    GVVT   G       YLDG  K+E +R
Sbjct: 206 QGA--IVFISHDRGFIARMATRI-----VDLDRGVVTSWPGN---YQAYLDG--KQEWLR 253

Query: 319 FR-KSPIVFEKRPPQDST-------------------------------NRP-------- 338
              +   +F+KR  ++                                 NR         
Sbjct: 254 VEAEKNALFDKRLAEEEVWIRQGVKARRTRNEGRVRALKALRQERSERLNRQGNAKMAVA 313

Query: 339 -------LLLDYTDISKKLGDFSLNVN-GGQIYQGEVVGILGPNGIGKTTFVKALAGVIS 390
                  L+ D  D++  L D +L  N    + +G+ + ++GPNG GK+T +K L   + 
Sbjct: 314 DTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCGKSTLIKLLIEKLQ 373

Query: 391 PDSGEVTGDVK--VSYKPQYISS-DFEGTVEDLLMSITAIHT---------SYYKSEIIK 438
           P SGEV    K  ++Y  QY  + D E TVED +       T         SY +  +  
Sbjct: 374 PQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQDRHILSYLQDFLFS 433

Query: 439 PLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRM 498
           P+       + VK LSGGE  R+ +A  L + A+L ++DEP+  LD+E    T  ++  +
Sbjct: 434 PMRAR----TPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIE----TLELLESL 485

Query: 499 ADEKEAAMFVVDHDILFQD 517
             E +  + +V HD  F D
Sbjct: 486 LTEYQGTLLLVSHDRAFID 504



 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 47/206 (22%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGE--VTGDVKVSYKPQYISSDFEGTVED 419
           I +GE V I+G NG GK++ +K L+G +  D GE  + G V VS   Q      +G+V  
Sbjct: 26  IERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNIDGSVTVSRLQQDPPKAEQGSVYS 85

Query: 420 LLMS--------ITAIHTSYYKSEIIKPLALENIL------------------------- 446
            + +        +   H   +     +P  +E +L                         
Sbjct: 86  YIAAGLKEVGEALEQYHQLSHDVAYAEPELMERMLNQMQKLQETLDHHNGWQLDSRIKQN 145

Query: 447 --------DSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRM 498
                   D S+ +LSGG  ++V++A  L  + DL L+DEP+  LD++    T   + + 
Sbjct: 146 CELLGLDPDKSLSELSGGWQRKVALARALVSEPDLLLLDEPTNHLDID----TIEWLEKF 201

Query: 499 ADEKEAAMFVVDHDILFQDYISDRFI 524
             + + A+  + HD  F   ++ R +
Sbjct: 202 LLDFQGAIVFISHDRGFIARMATRIV 227