Pairwise Alignments

Query, 784 a.a., DNA-directed DNA polymerase from Methanococcus maripaludis S2

Subject, 785 a.a., DNA polymerase II from Klebsiella michiganensis M5al

 Score =  129 bits (324), Expect = 6e-34
 Identities = 138/604 (22%), Positives = 261/604 (43%), Gaps = 81/604 (13%)

Query: 193 LEYVKDEKELIKRIIEILKEYD--IIYTYNGDNFDFPYLKKRAESFGLELKLGKNDEKIK 250
           LEYV     L++++      +D  ++  +N   FD   L+K AE + + L LG+ + +++
Sbjct: 197 LEYVASRPLLLEKLNAWFAAHDPDVLIGWNVVQFDLRVLQKHAERYRIPLMLGRGNSELE 256

Query: 251 ITKGGMNSKSYIP---GRVHID-LYPIARRLLNLTKYRLENVTEALFDVKKVDVGHENIP 306
             + G  +  +     GR+ ID +  +     N + + LE+V   L    K       I 
Sbjct: 257 WREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFALESVARELLGEGKA------ID 310

Query: 307 KMWDNLDE----------TLVEYSHQDAYYTQRIGEQFLPLEIMFSRVVNQSLYDINRMS 356
             WD +DE           L  Y+ QD     RI  +   +  +  R     L       
Sbjct: 311 NPWDRMDEIDRRFHHDKPALATYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGG 370

Query: 357 SSQMVEYLLLKNSYKMGVIAPNRPSGKEYQKRIRSSYEGGYVKEPLKGIHEDIVSMDFLS 416
           S     +L     +++G +APN  +          +  GGYV +   G+++ ++ +D+ S
Sbjct: 371 SVAAFSHLYFPRMHRLGYVAPNLGAVPP------QASPGGYVMDSRPGLYDSVLVLDYKS 424

Query: 417 LYPSIIMSHNLSPETIDCTCCSDEENGENEEILGHKFCKKSIGIIPKTLMDLINRRKKVK 476
           LYPSII +  + P  +       ++    E  LG +F ++    +P  +  + + R + K
Sbjct: 425 LYPSIIRTFLIDPVGLVEGLAHPDDAHSTEGFLGARFSREK-HCLPGIVGQIWHGRDEAK 483

Query: 477 KVLREKAEKGEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTHLGRQY 536
           +   +                  +++K++ N+ YG L     R++    A   T  G   
Sbjct: 484 QHKNKPL---------------SQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAI 528

Query: 537 IQKTIEEAENFGFKVIYADTDG--FYSKWADDKEKLSKY--ELLEKTREF--LKNINNTL 590
           +++T    E+ G+ VIY DTD    + K A   E+ S     L+    E+   +   + L
Sbjct: 529 MRQTKALIESQGYDVIYGDTDSTFVWLKRAHSDEEASSIGRSLVAFVNEWWAAELAKDGL 588

Query: 591 PGEMELEFEGYFKRGIFVT--------KKKYA-LIDE--NEKITVKGLEVVRRDWSNVSK 639
              +ELEFE +F R +  T        KK+YA +I E   +++  KGLE VR DW+ +++
Sbjct: 589 ASTLELEFETHFCRFLMPTIRGADTGSKKRYAGMIQEADEQRMVFKGLETVRTDWTPLAQ 648

Query: 640 NTQKNVLNALLKEGSVENAKKVIQDTIKELKDGKVNNEDLLIHTQLTKRIEDY-KTTAPH 698
             Q+ +   + +    +  +  +++TI +L +G++++  L+   +L + + +Y +   PH
Sbjct: 649 QFQQELYLRIFRH---QPYRDYVRETIDKLMNGELDDR-LVYRKRLRRPLAEYQRNVPPH 704

Query: 699 VEVAKKILKSGNRVNTG--------DVISYIITSGNKSISERAEILENAKNYDTNYYIEN 750
           V  A+  L     V  G          I Y+ T+G     E  +  ++  +Y+  +Y+  
Sbjct: 705 VRAAR--LADEQNVRLGRPQQYQQRGSIKYVWTTGG---PEPVDYQQSPLDYE--HYLSK 757

Query: 751 QILP 754
           Q+ P
Sbjct: 758 QLEP 761