Pairwise Alignments

Query, 394 a.a., RNA ligase from Methanococcus maripaludis S2

Subject, 394 a.a., RNA ligase from Methanococcus maripaludis JJ

 Score =  777 bits (2006), Expect = 0.0
 Identities = 380/394 (96%), Positives = 388/394 (98%)

Query: 1   MDKTYFSEDILNFEEFIIDASKKLNIDEDTLKNGFKRKLITKYEYNGRKYLCFKKKLKHI 60
           MDKTYFSEDILNFEEFIIDASKKLNIDED+LK+GFKRKLITKYEYNG KYLCFKKKLKHI
Sbjct: 1   MDKTYFSEDILNFEEFIIDASKKLNIDEDSLKSGFKRKLITKYEYNGEKYLCFKKKLKHI 60

Query: 61  ERGTILFLNDNLDFIIGYPKIRRAMVLESSVKKYFNGKIAVEEKLDGYNIRIVKMHDEII 120
           ERGTILFLNDNLDFIIGYPKIRRAMVLESSVKKYFNGKIAVEEKLDGYNIRIVKMHDEII
Sbjct: 61  ERGTILFLNDNLDFIIGYPKIRRAMVLESSVKKYFNGKIAVEEKLDGYNIRIVKMHDEII 120

Query: 121 AITRGGKICPFTTKKVKKYLNTKFLDDFPELMLCGEMVGLNNPYVNHYYPEADRTYENLG 180
           AITRGGKICPFTTKKVKKY+NTKFLDDFPELMLCGEMVGLNNPYVNHYYPEAD+TYENLG
Sbjct: 121 AITRGGKICPFTTKKVKKYINTKFLDDFPELMLCGEMVGLNNPYVNHYYPEADKTYENLG 180

Query: 181 FYIFDVRNKKTNLALSIYEKEKILDEYNIPYVKPIKIIDSNEIDELWNILDDLNENHREG 240
           FYIFDVRNK+TNLALSIYEKEKILDEYNIPYVKPIKIIDS +IDELW+ILDDLNENHREG
Sbjct: 181 FYIFDVRNKETNLALSIYEKEKILDEYNIPYVKPIKIIDSRDIDELWDILDDLNENHREG 240

Query: 241 VVLKDPEMIKNPIKYTTHSTQCGDLSIAFSYVYDLGIDFMFSRLVREGYQSFEKCESEEE 300
           VVLKDPEMIKNPIKYTTHSTQCGDLSIAFSYVYDLGIDFMFSRLVREGYQSFEKCESEEE
Sbjct: 241 VVLKDPEMIKNPIKYTTHSTQCGDLSIAFSYVYDLGIDFMFSRLVREGYQSFEKCESEEE 300

Query: 301 RKKRAHELGESILLPMVETITEISKESVAKECFELYFDSEEEFIEFINYLKTMHINFAVE 360
           RKKRAH+LGESILLPMVETI EISKESVAKECFELYFDSE EF EFINYLKTMHINF VE
Sbjct: 301 RKKRAHDLGESILLPMVETINEISKESVAKECFELYFDSEAEFNEFINYLKTMHINFTVE 360

Query: 361 SREYIKKDIFKAKINRIYNSTSDKIKSHLDGNLW 394
           SREYIKKDIFKAKINRIYNSTSDKIKSHLDGNLW
Sbjct: 361 SREYIKKDIFKAKINRIYNSTSDKIKSHLDGNLW 394