Pairwise Alignments

Query, 457 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 384 a.a., coenzyme PQQ biosynthesis protein E from Pseudomonas stutzeri RCH2

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 18/173 (10%)

Query: 139 CNINCPFCSVDEGIHSKSRKNDYYVDKDYLVSEYEKIADFKGYKKLEAHLDG--QGEPSL 196
           C + CP+CS            D+    D L S  E I  F+  +++ A   G   GEP +
Sbjct: 29  CPLQCPYCS---------NPLDFARSHDEL-STAEWIEVFRQAREMGAAQLGFSGGEPLV 78

Query: 197 YYPLPDLVQNLNEINSKNNGIVSIQTNGVHLTEKLIDDLEVAGLHRINLSINAMDEKFSK 256
              L +L++    +    N I    T+G+ LTE+ I     AGL  I +S  A DE+ + 
Sbjct: 79  RQDLVELIEAARGLGYYTNLI----TSGIGLTEEKIASFAEAGLDHIQISFQAADEEVNN 134

Query: 257 GLSGSKNYDIEKIMKIAEYIKNSKIHLLIAPLLLPNYNDEEFKKVLDFAVELE 309
            L+GSK     K +++A  +K    + ++   +   +N +  ++++   +ELE
Sbjct: 135 LLAGSKKAFAHK-LEMARAVKKHG-YPMVLNFVTHRHNIDNIEQIIRLCIELE 185