Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 208 a.a., putative transporter, required for glycine utilization (from data) from Pseudomonas stutzeri RCH2

 Score = 95.1 bits (235), Expect = 8e-25
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 10/201 (4%)

Query: 12  IIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPNDMGVA 71
           +I + A A+ GA+ G+++G+DL GI +LG +TALGGG  RD+L+   P    +  +    
Sbjct: 9   LIAITAEAMSGAIMGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTF 68

Query: 72  LIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLT 131
            IG   AIV   +       + +  + D +GL AFT  G  +A         +++   +T
Sbjct: 69  TIG--AAIVTGFIARHLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGAHPSIVVLAGVIT 126

Query: 132 GVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIVVL--- 188
           G+ GG++ D+L  + P  L  + YA+ ++   + FY+ +   L LE++  + ++  L   
Sbjct: 127 GIFGGLMRDVLCNQVPMVLQRELYATVALFTGV-FYVGM---LWLEINTTLATLAALGSG 182

Query: 189 -MIRIVAILCKWSLPKFYSEQ 208
            + R++A+   W LP F  ++
Sbjct: 183 FLFRVLAMTFHWKLPDFNGKE 203



 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSP 65
           +F +++ +GL+AF V+G    +  G     +++ G++T + GG+ RD+L N +P  L+  
Sbjct: 89  VFLLVDGLGLVAFTVIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCNQVPMVLQRE 148

Query: 66  NDMGVAL 72
               VAL
Sbjct: 149 LYATVAL 155