Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 98.6 bits (244), Expect = 7e-26
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 3/201 (1%)

Query: 5   NIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIP-YALR 63
           ++ +++++ G   FAV G L   +  +D  G++VL  +TA+GGG  RD+ +   P + ++
Sbjct: 4   SLLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIK 63

Query: 64  SPNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFG 123
             N + V +I   CA+ +  V        +I+ + DA+GL+ F   G   A  +  S   
Sbjct: 64  DTNYLWVIMIT--CALTMLLVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALI 121

Query: 124 IIILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVIC 183
            II+  +TG GGGII D+L ++ P  L  + YA+  IIG I    A+    S   + +  
Sbjct: 122 AIIMGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTALLSG 181

Query: 184 SIVVLMIRIVAILCKWSLPKF 204
               L+IR+ AI    SLP F
Sbjct: 182 VFSTLLIRLGAIRWHLSLPTF 202