Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 203 a.a., Protein of unknown function UPF0126 from Pseudomonas syringae pv. syringae B728a

 Score = 97.8 bits (242), Expect = 1e-25
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 4/200 (2%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYA-LRS 64
           +  ++ +I + A A+ GAL   ++G+D  G++++  +TALGGG  RD+L+   P   ++ 
Sbjct: 1   MLLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLIGHYPLTWVKH 60

Query: 65  PNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGI 124
           P  + +  +     I I  +     S   +  + DA+GL AFT  G M A          
Sbjct: 61  PEYLVLTSVAALVTIFIAPLMRHLRS---LFLVLDALGLVAFTLIGCMTALEAGHGLLIA 117

Query: 125 IILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICS 184
            +   +TGV GGI+ DI     P     + YAS S + A  F L     L  E + +I  
Sbjct: 118 SVCGVITGVFGGILRDIFCNDIPLIFRRELYASVSFLAAWCFLLCQYLQLPDEQAVLITL 177

Query: 185 IVVLMIRIVAILCKWSLPKF 204
              L++R++AI  +W +PKF
Sbjct: 178 FGGLLLRLLAIRFRWEMPKF 197



 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 24/76 (31%), Positives = 44/76 (57%)

Query: 5   NIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRS 64
           ++F +++ +GL+AF ++G +  ++ G  LL   V G++T + GGI RD+  N IP   R 
Sbjct: 86  SLFLVLDALGLVAFTLIGCMTALEAGHGLLIASVCGVITGVFGGILRDIFCNDIPLIFRR 145

Query: 65  PNDMGVALIGVWCAIV 80
                V+ +  WC ++
Sbjct: 146 ELYASVSFLAAWCFLL 161