Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 203 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.0 bits (245), Expect = 5e-26
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 2/193 (1%)

Query: 12  IIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPNDMGVA 71
           +IG+LA A+ GAL   +K +DL G++++G++TA+GGG  RD+L+   P    +     +A
Sbjct: 5   LIGILAEAMTGALAAGRKQMDLFGVVIIGLVTAIGGGTLRDMLLGNYPLIWIANWHYLIA 64

Query: 72  LIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLT 131
           +       V+       +   ++    DA+GL+ F+ TGA        S    + +  +T
Sbjct: 65  IAAASLLTVLIAPLMRYLGRLFLAI--DALGLAVFSITGAQKTLMLGYSPVVAVAMGVVT 122

Query: 132 GVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIVVLMIR 191
           GV GG++ DIL  + P     +FYA  S++ A  + L  LS      S + C ++   +R
Sbjct: 123 GVFGGVLRDILCNEIPLIFRREFYALASLLTASLYVLLALSGFGGWPSLLGCLLLGFGLR 182

Query: 192 IVAILCKWSLPKF 204
           + AI   WS+P F
Sbjct: 183 MCAIRYHWSMPTF 195



 Score = 45.1 bits (105), Expect = 9e-10
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALR 63
           +F  ++ +GL  F++ GA K +  G   +  + +G++T + GG+ RD+L N IP   R
Sbjct: 85  LFLAIDALGLAVFSITGAQKTLMLGYSPVVAVAMGVVTGVFGGVLRDILCNEIPLIFR 142