Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 207 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (294), Expect = 1e-31
 Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 3/199 (1%)

Query: 7   FFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIP-YALRSP 65
           F+  ++ G   FA+ GAL   +  +D  G+ VL  +TA+GGG  RD ++   P + LR P
Sbjct: 4   FYFFDLCGTAVFALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDP 63

Query: 66  NDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGII 125
           N + V L  V   +V  +        +Y + I DA+GL+ FT  GA  A +  ++    +
Sbjct: 64  NYLIVILATVGFTLVFIR--RPRKVPQYTLPIADALGLALFTVIGAQKALSLGLNGMSAV 121

Query: 126 ILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSI 185
           I+  +TGVGGGII D+L ++ P  L  + YA+ SI+G IA+ L++   ++ + +  +  +
Sbjct: 122 IMGLITGVGGGIIRDVLCRQIPMVLRTEIYATASILGGIAYTLSLQLGMNSQTALWLSML 181

Query: 186 VVLMIRIVAILCKWSLPKF 204
             L++R+ AI    SLP F
Sbjct: 182 SALILRLAAIRWHLSLPAF 200