Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 207 a.a., putative transporter, required for glycine utilization (from data) from Phaeobacter inhibens DSM 17395

 Score = 79.3 bits (194), Expect = 5e-20
 Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 3/202 (1%)

Query: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSP 65
           I  +++   +L FA  GAL   +  LD++G   +  +TA+GGG  RDLL++  P      
Sbjct: 3   ILTLLDYASVLVFAASGALVASRAQLDIVGFAFVACLTAVGGGTVRDLLLDRHP-VFWIG 61

Query: 66  NDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGII 125
           +   + L      +V F     +   ++I+ + D+  L+   + G   A         ++
Sbjct: 62  DSTNILLAAAAAVLVFFTAHLVESRLRWIVWL-DSFALAVAVSAGTGAAILTGQPPVIVV 120

Query: 126 ILATLTGVGGGIISDILLQKTPSALTE-DFYASCSIIGAIAFYLAILSNLSLEMSAVICS 184
           ++   TG  GG++ D++  + P  L + + Y SC++ GAI   ++I   L    + V C+
Sbjct: 121 LMGMATGTLGGLMRDVVCNEVPLVLKQGELYISCAMAGAITAVVSIAFGLPNRWALVACA 180

Query: 185 IVVLMIRIVAILCKWSLPKFYS 206
           +V  ++R  +I   W LP + S
Sbjct: 181 VVCWVLRAGSITFGWHLPVYRS 202