Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 204 a.a., putative membrane protein from Dechlorosoma suillum PS

 Score = 88.2 bits (217), Expect = 1e-22
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 6/200 (3%)

Query: 12  IIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPNDMGVA 71
           +I + A A+ GAL   ++ +D+ G+  +  +TALGGG  RD+++   P            
Sbjct: 7   LIAITAEAMSGALAAGRRNMDIFGVAFIAFVTALGGGTIRDMVLGHFPIGWTQHPPYIYL 66

Query: 72  LIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLT 131
           +I       +F  F   +   +++   DA+GL AF+  G  +A     +   +I+   +T
Sbjct: 67  VISAGLVTTLFARFMHHLKTVFLVL--DALGLIAFSLIGCEVALGMGYAPVVVIMAGMIT 124

Query: 132 GVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSL--EMSAVICSIVVLM 189
           G+ GGI+ D+L  + P    ++ YAS S+  A+     +L +L L  E + +I   + L 
Sbjct: 125 GIFGGILRDVLCNQVPVVFRQELYASVSL--AVCSLYLVLRDLGLGTEANTLISFGLGLA 182

Query: 190 IRIVAILCKWSLPKFYSEQK 209
           +R+ AI   W LP F   Q+
Sbjct: 183 LRLCAIWRGWKLPTFSYRQR 202



 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 21/69 (30%), Positives = 41/69 (59%)

Query: 4   ENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALR 63
           + +F +++ +GL+AF+++G    +  G   + +I+ G++T + GGI RD+L N +P   R
Sbjct: 85  KTVFLVLDALGLIAFSLIGCEVALGMGYAPVVVIMAGMITGIFGGILRDVLCNQVPVVFR 144

Query: 64  SPNDMGVAL 72
                 V+L
Sbjct: 145 QELYASVSL 153