Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 207 a.a., glycine transporter (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  116 bits (290), Expect = 3e-31
 Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 4/201 (1%)

Query: 4   ENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALR 63
           +++ + ++I G  AFAV GALK  +  LD LG++VL  +T +GGG+ RD+++   P A+ 
Sbjct: 2   QDMLYALDIFGTFAFAVAGALKAARHELDALGVLVLATVTGVGGGMVRDMMLAYGPPAVF 61

Query: 64  SPNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFG 123
             ND    L+ +   +++F       + + +++  DAVGL  FT  G   A  F +    
Sbjct: 62  H-ND-AYLLVCLAGGLLVFFFARGVAARRNLVRYADAVGLGVFTAIGGAKAMAFGLGGLP 119

Query: 124 IIILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFY-LAILSNLSLEMSAVI 182
           ++ LA LT  GGG+I D+L+ + P+ L  DFYA+ SI+GA+A   LA L    LE  A  
Sbjct: 120 VVFLAVLTATGGGVIRDVLVGEVPAVLRTDFYATASILGAVALLGLAALGRPPLEQLAG- 178

Query: 183 CSIVVLMIRIVAILCKWSLPK 203
            + V   +R++AI  +  LP+
Sbjct: 179 SAAVTTGLRLMAIWLRMRLPR 199