Pairwise Alignments

Query, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

Subject, 208 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  112 bits (281), Expect = 4e-30
 Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 3/198 (1%)

Query: 8   FIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIP-YALRSPN 66
           +  ++ G   FA+ GAL   +  +D  G+IVL  +TA+GGG  RD L+   P + +R PN
Sbjct: 6   YFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPN 65

Query: 67  DMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIII 126
            + V L  V   +++ +        +Y + + DA+GL+ FT  GA  A N  +S    ++
Sbjct: 66  YIIVILATVLACLLLVR--RPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMIAVV 123

Query: 127 LATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIV 186
           +  +TGVGGGII D+L ++ P  L  + YA+ SI+G I + +++   +  + +  +    
Sbjct: 124 MGLITGVGGGIIRDLLCRQIPMVLRTEIYATASIVGGIGYTVSLAYGMGEKTALFLAMTS 183

Query: 187 VLMIRIVAILCKWSLPKF 204
            L+IR+ AI    SLP F
Sbjct: 184 ALIIRLCAIKWHLSLPAF 201