Pairwise Alignments

Query, 373 a.a., DUF354 domain-containing protein from Methanococcus maripaludis S2

Subject, 337 a.a., DUF354 domain-containing protein from Methanococcus maripaludis JJ

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 70/351 (19%), Positives = 141/351 (40%), Gaps = 27/351 (7%)

Query: 1   MNIAIFINTPAQFHFYRNIAKELKNRGHFVELLFRDYGENLEIAKELGLNPTVYAKPSDS 60
           M++ I +      H++  +  +    G    +  R +    ++    G +       +DS
Sbjct: 1   MDVWIDLTNSPHIHYFSQLIDKFNREGIEYYITARKFQSLEDLIDIYGYDYISVGNHADS 60

Query: 61  KYGKILSLPSDVLRATKLLKKFKPDIITGFGVYDAFSSFLVNVPCIVF--NDSEPFI--N 116
              K+++    V+  TK+ KK +P I        A +   V +P + F  N    F+  N
Sbjct: 61  LEEKLINSSKRVIELTKIAKKLEPKI--------AIAKHSVELPRVAFGMNIHSIFVLDN 112

Query: 117 SSYAVQFKLFMPFTNVLITPEAFQ-----PNFGTKHINIPSYKEFSYLHPNY---YTPKE 168
              + Q +L +P  N +I PE  +      +FG    +     E S ++      ++  E
Sbjct: 113 EHASAQNRLTVPLVNDIICPEGTKLVLNGSSFGKYIDSFEGTCEVSNVNSRLNSSFSIDE 172

Query: 169 DIFELIGIEKNEEYILLRFNAFDAVHDAGITGFTKENKIKLVKELEKHCKVFISSETQVP 228
            I E + I+++    ++R    ++ +  G          KL  +++ +   F   E Q  
Sbjct: 173 SIKEKLNIDESLPITIMRPRP-NSSYCNGKKDIIPMIIDKLKSQMDCNIVAFPRDEDQRE 231

Query: 229 KEIEKNILKTPKSRIHDVLYYAKILITDTQTMTTEAALLGTPALR-YNKFVGGKDMSNFI 287
           K +   ++         +LYY+  +I    TM  EAA+LG P +  Y + + G D +  I
Sbjct: 232 KYVSMGVIVPKTIDAISLLYYSDAMIGAGGTMNREAAVLGVPTISCYPEKLLGVD-NYLI 290

Query: 288 ELEKNYGLIFNYQNSEKIFERAFELLNTENLKEIWKKKRELLLKNKIDSTS 338
           E E+    + + ++ ++I     + +   N     +   EL+ +  + S S
Sbjct: 291 EKER----MIHTRDLDEIVNHVMDNIGKRNNGITLEDPTELMFEKVVGSLS 337