Pairwise Alignments

Query, 411 a.a., flippase from Methanococcus maripaludis S2

Subject, 410 a.a., Membrane protein involved in the export of O-antigen and teichoic acid from Pseudomonas stutzeri RCH2

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 83/398 (20%), Positives = 162/398 (40%), Gaps = 21/398 (5%)

Query: 24  ISYAIVLMIGRTFGTEGLGQYSFIIAFTAFVAYIADFGIEYYLLREI-AKDNQNYDLISK 82
           +    +L++ RT G    G  S +I ++  VA + D+G     LR+I A+ ++  +++S 
Sbjct: 17  VQLGTLLILARTLGPSDFGFISIVITWSTIVALVTDYGFGMRALRDIGAERHRAGEIMSA 76

Query: 83  SFGIKVFLGI-LCWFLIVFLTIFINKDPLVKLAIIIYGLASICSSIGLLFKSIIHANMVS 141
           S   K  L +  C  L+  +   ++     + A +++ L ++ SS G L  ++  +    
Sbjct: 77  SLAAKSVLVLPACIVLLPIILFVLDLHTTERFAAVLFLLGTLASSYGDLGLTVFRSIGQF 136

Query: 142 KYESISILTERILTLIVGGVLLYFTKNLFLFMVVLTLDIFILNILRYNYASKYAKIRLKF 201
             E+  +    ++  ++ G  +    ++    V   L   I         SK   + L  
Sbjct: 137 HRETKIVAATALVHFVLIGAAILLRNDVLAIGVAFLLSRLIYATFALRALSKI--LALGG 194

Query: 202 NLKDGINIL----KKSYFFWFIYVFSFIYYNTDILMLGIMQSDSSVGIYRGGYFFIQAAM 257
            L+    +L    K S  F      + I+   D++++  +    + GIY  G   IQ A+
Sbjct: 195 ILRSSWQVLGERFKSSTSFAIDSGATNIFAQLDVILVNHLAGREAAGIYFAGSRLIQGAV 254

Query: 258 IIPVVVISTVMPSISI-LHTENRELLKTLFKKAFIFLSFLGISL--NLVLFIGSQSFIGL 314
              V++ S  +P  +  LH +   L++     A I   + G+ L   L  F     F   
Sbjct: 255 PFSVLLASVHIPRFAYQLHNKTAGLIR---YGARILGEYTGMGLIFALAFFFIGPLFTDY 311

Query: 315 FFGNEFVESILVLQIMSFSIISIFLNSLYGSLLNATGNEKKYAKVLGF--SAILNVCLNF 372
           F G E+ E   +    +    + F+ +  G  L A G    + +  G   S ++ V   +
Sbjct: 312 FLGAEYAELNTLWLAFACFTAARFIAAGLGVQLLAMGT--GFLRTFGIIASGVITVACYW 369

Query: 373 LLIPSMSYAGVAVSTLISNWVVTVILMFSCGRVINLKR 410
           + IPS    G+  +  +S   + V+       V+N+ R
Sbjct: 370 IFIPS---HGIQAAPWVSTLGMVVLTFIYGYAVLNIYR 404