Pairwise Alignments

Query, 144 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 135 a.a., flagellar protein F from Methanococcus maripaludis JJ

 Score = 57.4 bits (137), Expect = 8e-14
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 1   MGFSEIYGVAFLSIILLISITVIYGTVDSNLNNILSANDDHAYNLLKKSKENLTVQYEGI 60
           MGFS   G+  L   +LI    +Y TVD     +  A + H+  L  K  E +TV    +
Sbjct: 1   MGFSSTAGLTLLLTTVLICSIYMYSTVDLTSAKVNDAYNQHSEYLKNKLDEKITV--VSV 58

Query: 61  DSDSGILNITVVNNGNILEDASKWTVIFEGDVVNNPVIE-KTYIEPLSRTQIYIETIYNS 119
           +  S  +NIT++N G +  +   W V++ G  VN  +   + Y+ PL    I +      
Sbjct: 59  EHSSENMNITLLNEGQLTHELDNWDVLYNGTPVNFTITSGELYLAPLESVNISV------ 112

Query: 120 TTIDDKRVVISGEFGTTF 137
                 R+ +  E+G  +
Sbjct: 113 NASSPGRISVVSEYGNQY 130