Pairwise Alignments

Query, 569 a.a., sodium-extruding oxaloacetate decarboxylase subunit alpha from Methanococcus maripaludis S2

Subject, 514 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis JJ

 Score = 65.9 bits (159), Expect = 4e-15
 Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 37/277 (13%)

Query: 2   VKITDTSFRDAHQSLMATRLRTEDMLPIAEKMDEVGFYSMEVWGGATFDSCIRYLNEDPW 61
           V++ DT+ RD  Q+     L  E  + IA+ + E+G  ++E     +        +E   
Sbjct: 24  VRVFDTTLRDGEQT-PGVSLMPEQKMDIAKNLSEIGVDAIEAGFPVS--------SEGEQ 74

Query: 62  ERLRELKGKIQNTPLQMLLRGQNLVGYRHYPDDVVDKFIQKSIENGIDIVRIFDALNDIR 121
           E ++ +     +  +  L R              V K I  +I+ G+D +  F A + + 
Sbjct: 75  ESIKNITSLGLDAEICGLARA-------------VKKDIDIAIDCGVDSIHTFIATSPLH 121

Query: 122 NVEYSIKAVKK-----------YGAEVQGAISYTTSPVHTTE--QFVELAKQFEELGCDS 168
             EY +K  K+           Y  E    + ++      TE     E+ K+  E G D 
Sbjct: 122 R-EYKLKMSKEKIIDIAVESIEYIKEHGVIVEFSAEDATRTELDYLKEVYKKAVEAGADR 180

Query: 169 LCIKDMAGLLRPFDAKELVGMLKEELSIPIDLHSHCTAGIAPLAYMSSVEAGIDILNCAM 228
           + + D  G++ P     L+  LK ++++PI +H H   GIA    +++VEAG + ++C +
Sbjct: 181 INVPDTVGVMVPNSMSYLIKELKNDINVPISVHCHNDFGIAVSNSVAAVEAGAEQVHCTV 240

Query: 229 SPLSMGTSQPPVESIVAALKGT-KYDTNLDLVLLTEI 264
           + L        +E  V  L      +TN++  +LT++
Sbjct: 241 NGLGERAGNASLEETVMTLNMVYGINTNVNTKMLTKL 277