Pairwise Alignments

Query, 350 a.a., TIGR00303 family protein from Methanococcus maripaludis S2

Subject, 381 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  129 bits (324), Expect = 1e-34
 Identities = 110/353 (31%), Positives = 176/353 (49%), Gaps = 32/353 (9%)

Query: 11  FLDKLKGTNGLFSCVISSIETTKYVGISGVNKSVID--YTPAADMELVTIGESLSLNHPP 68
           +L +++G + L + +++  ET    GIS   K+  D  YT  AD E +  G +    +P 
Sbjct: 18  WLTQVQGRSPLLAVLLAFTETALIPGISAAGKTPRDRRYTAHADAEFLYNGPNPQPQYPL 77

Query: 69  IDATGCPSPATITRAAVDILKIPVMTVDAGSYIKPKIPYISVDQRPTGDIQKGLGMDNS- 127
                  SP  ITRA V+ L  P+  +DAG      +P I ++ +P   +  G  M  + 
Sbjct: 78  PPLQAGASPVLITRACVEQLATPLFLIDAGLTQPLPVPAIRLNSQPARCLSTGQAMPIAI 137

Query: 128 -KELLNLGKIIGNNNIYDS----LVIGESVPGGTTTALGVLLGLGYDARDKISSGSVENP 182
            ++L   G+  G           LV+GE V GGT+TAL +LL LG +A   +SS      
Sbjct: 138 AQQLFQQGQAHGAAIAAQHPDRWLVLGECVVGGTSTALALLLALGIEAAGCVSSSHPTCN 197

Query: 183 KDLKLSVVESGL---KNSKSKDVFDVLNAVGDKMMPVVAGMAISAVSKGKPVLLAGGTQM 239
              KL++V+ GL    +  ++   ++  A+ D M+   AGMA+ AVS+ + VLLAGGTQM
Sbjct: 198 HGQKLALVQQGLAAIPDRPARSPLELAAAIADPMLIAAAGMAM-AVSQTQSVLLAGGTQM 256

Query: 240 ASVLAAIKEISPK--ILKSGLLGISTTEFVLNDKNADLKDIIEQIGDIPLYASKFGYE-- 295
            +  A +  I+      +   + + TT +V+ D +A     + Q+G  P  AS+FG+E  
Sbjct: 257 LAAYALMAAIAQTGVAWQPDRIAVGTTRWVMVDPSAQ----VAQLG--PAIASRFGWEPL 310

Query: 296 ---------NSKIDGLKAYCNGSVKEGVGAGGIA-TYCYSNGLNPKDIREYVE 338
                     S+   L+ Y  G VKEGV AGG+A     + G + + +R++V+
Sbjct: 311 LLSTQLNFQRSRHAQLQVYEQGFVKEGVAAGGMAIAASLATGASVETLRQWVD 363