Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 256 a.a., tRNA:Cm32/Um32 methyltransferase from Pseudomonas fluorescens FW300-N2E2

 Score = 86.3 bits (212), Expect = 5e-22
 Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 18/234 (7%)

Query: 5   VILVNPKYGGNLGAIARNMMNFDVEELRIVGTPEILDDEAYIRAVHAKNILNNAKFYSKL 64
           V+LVN  + GN+G  AR M N  +  L +V        EA  RA  A +IL NA+  + L
Sbjct: 7   VVLVNTSHPGNIGGAARAMKNMGLSRLVLVEPRLFPHHEADARASGAGDILANAQVVATL 66

Query: 65  EDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKK---HSSISGTLGIVFGREDDGLKN 121
           EDA+   +  + T+     DR +    + PRE   K    ++    + +VFGRED GL N
Sbjct: 67  EDALVGCNLVLGTSAR---DRRIPWPLLDPRECGTKVVEEAAQGFEIALVFGREDSGLTN 123

Query: 122 EDVELCDILVSVPTSNKYPILNLSHAVSVILYEI---YFESFSKDIPYD----LNMKNAS 174
           ++++ C   V +P+  ++  LNL  AV V+ YE+   +  +  K    +     + ++ +
Sbjct: 124 DELQRCHFHVHIPSDPEFSSLNLGAAVQVLSYEVRMAWLAAEGKPSKVEKTEVTSPRSET 183

Query: 175 VDEKNALLRFFNEFVDRSKDV----PDYRKDICKTIFKRIVGRAFISGKEANSL 224
           +   + L RF+        D+    PD  + +   + +R+ GR+ +S  E N L
Sbjct: 184 LATMDELERFYEHLEQTLVDIEFLDPDKPRHLMARL-RRLYGRSSVSRAEMNIL 236