Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 258 a.a., RNA methyltransferase, TrmH family, group 1 from Pseudomonas stutzeri RCH2

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 6/154 (3%)

Query: 5   VILVNPKYGGNLGAIARNMMNFDVEELRIVGTPEILDDEAYIRAVHAKNILNNAKFYSKL 64
           V+LVN  + GN+G  AR M N  +  L +V   +     A  RA  A +IL+ A+    L
Sbjct: 8   VVLVNTSHAGNIGGAARAMKNMGLSRLVLVDPEDFPSPNAVARASGATDILDAAQVVGTL 67

Query: 65  EDAISDIDFTVATTGAVCGDRNVNRVPITPRELAK---KHSSISGTLGIVFGREDDGLKN 121
           E+A+      + T+     DR +    + PRE A    + +S  G + +VFGRE  GL N
Sbjct: 68  EEALVGCSLVLGTSAR---DRRIPWPLLDPRECAAVSVEQASGGGEVALVFGREYAGLTN 124

Query: 122 EDVELCDILVSVPTSNKYPILNLSHAVSVILYEI 155
           E+++ C   V +P+  ++  LNL+ AV V+ YE+
Sbjct: 125 EELQRCQYHVHIPSDPQFSSLNLAAAVQVLTYEV 158